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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: NRXN1

Summary for NRXN1

Gene informationGene symbol

NRXN1

Ensembl ID

ENSG00000179915

Entrez ID

9378

Gene nameneurexin 1
SynonymsHs.22998|KIAA0578
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: NRXN1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4101880.00e+00

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Expression of NRXN1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NRXN1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NRXN1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NRXN1hsa-miR-6867-5p100NM_138735
NRXN1hsa-miR-990299.891NM_001135659
NRXN1hsa-miR-5010-3p99.8345NM_001135659
NRXN1hsa-miR-3688-5p99.1221NM_138735
NRXN1hsa-miR-568898.8749NM_001135659
NRXN1hsa-miR-9983-3p98.8693NM_138735
NRXN1hsa-miR-3613-3p98.6097NM_001135659
NRXN1hsa-miR-495-3p98.3253NM_001135659
NRXN1hsa-miR-129-5p98.1551NM_138735
NRXN1hsa-miR-126197.764NM_138735
NRXN1hsa-miR-128497.1762NM_138735
NRXN1hsa-miR-315496.8327NM_001135659
NRXN1hsa-miR-335-5p96.3124NM_001135659
NRXN1hsa-miR-129096.2139NM_138735
NRXN1hsa-miR-6818-5p95.8576NM_001135659
NRXN1hsa-miR-471895.8481NM_001135659
NRXN1hsa-miR-59995.846NM_001135659
NRXN1hsa-miR-4482-3p95.8323NM_138735
NRXN1hsa-miR-63695.4231NM_001135659
NRXN1hsa-miR-654-3p95.3811NM_138735
NRXN1hsa-miR-6740-3p95.1517NM_001135659
NRXN1hsa-miR-5011-5p94.6088NM_138735
NRXN1hsa-miR-23b-3p94.479NM_138735
NRXN1hsa-miR-23a-3p94.479NM_138735
NRXN1hsa-miR-23c94.479NM_138735
NRXN1hsa-miR-365894.049NM_001135659
NRXN1hsa-miR-380-3p93.894NM_138735
NRXN1hsa-miR-433093.8423NM_138735
NRXN1hsa-miR-196a-3p93.7237NM_001135659
NRXN1hsa-miR-431993.5168NM_001135659
NRXN1hsa-miR-3680-3p93.387NM_001135659
NRXN1hsa-miR-9-3p93.1958NM_001135659
NRXN1hsa-miR-377-3p93.1425NM_001135659
NRXN1hsa-miR-57792.8653NM_138735
NRXN1hsa-miR-4802-3p92.833NM_138735
NRXN1hsa-miR-443892.2573NM_001135659
NRXN1hsa-miR-656-3p92.2309NM_138735
NRXN1hsa-miR-3691-5p92.0808NM_138735
NRXN1hsa-miR-1213691.9452NM_138735
NRXN1hsa-miR-7-1-3p91.8528NM_001135659
NRXN1hsa-miR-7-2-3p91.8528NM_001135659
NRXN1hsa-miR-942-5p91.8078NM_001135659
NRXN1hsa-miR-311991.6803NM_001135659
NRXN1hsa-miR-19b-2-5p91.6162NM_138735
NRXN1hsa-miR-19b-1-5p91.6162NM_138735
NRXN1hsa-miR-125b-5p91.2707NM_001135659
NRXN1hsa-miR-125a-5p91.2707NM_001135659
NRXN1hsa-miR-205290.9049NM_138735
NRXN1hsa-miR-5582-3p90.8473NM_001135659
NRXN1hsa-miR-485-3p90.7282NM_001135659
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Motifs and transcription factors (TFs) regulating NRXN1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NRXN1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
NRXN1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
NRXN1transfac_pro__M07397ZNF148 (directAnnotation).
NRXN1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
NRXN1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
NRXN1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
NRXN1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
NRXN1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
NRXN1homer__GGGGGGGG_MazMAZ (directAnnotation).
NRXN1transfac_pro__M01175ZBTB7B (directAnnotation).
NRXN1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
NRXN1tfdimers__MD00151CHURC1 (directAnnotation).
NRXN1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
NRXN1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
NRXN1transfac_pro__M01303SP1 (directAnnotation).
NRXN1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
NRXN1swissregulon__hs__CHD1CHD1 (directAnnotation).
NRXN1transfac_pro__M02090E2F4 (directAnnotation).
NRXN1transfac_pro__M01714KLF15 (directAnnotation).
NRXN1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
NRXN1jaspar__MA1122.1TFDP1 (directAnnotation).
NRXN1hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
NRXN1transfac_pro__M02089E2F3 (directAnnotation).
NRXN1metacluster_3.14WT1; WT1 (directAnnotation).
NRXN1metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
NRXN1metacluster_126.3LIN28B; LIN28B (directAnnotation).
NRXN1hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
NRXN1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
NRXN1cisbp__M07938E2F1 (directAnnotation).
NRXN1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
NRXN1transfac_pro__M07436WT1 (directAnnotation).
NRXN1transfac_pro__M02281SP1 (directAnnotation).
NRXN1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
NRXN1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
NRXN1transfac_pro__M02898SMAD3 (directAnnotation).
NRXN1transfac_public__M00491PATZ1 (directAnnotation).
NRXN1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NRXN1"Calcium citrate"

DB11093

small molecule
NRXN1"Calcium phosphate dihydrate"

DB14481

small molecule
NRXN1"Calcium Phosphate"

DB11348

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."