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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: NR4A3

Summary for NR4A3

Gene informationGene symbol

NR4A3

Ensembl ID

ENSG00000119508

Entrez ID

8013

Gene namenuclear receptor subfamily 4 group A member 3
SynonymsCHN|CSMF|MINOR|NOR1
Gene typeprotein_coding
UniProtAcc

Q92570


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Dataset with differentially expressed gene: NR4A3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro-0.2880542.02e-03

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.4258491.14e-13

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells0.5786395.30e-09

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells0.4476240.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.3995114.95e-35

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostB cells0.3949418.20e-13

GSE169246_PacAteTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpreMono/Macro-0.3349381.71e-29

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.7614470.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.8872480.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs1.599612.56e-05

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.6088061.37e-12

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Expression of NR4A3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NR4A3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NR4A3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NR4A3hsa-miR-5011-5p99.9994NM_006981
NR4A3hsa-miR-190a-3p99.9957NM_006981
NR4A3hsa-miR-548p99.1729NM_006981
NR4A3hsa-miR-576-5p98.563NM_006981
NR4A3hsa-miR-10527-5p97.2193NM_006981
NR4A3hsa-miR-990295.9926NM_006981
NR4A3hsa-let-7c-3p95.9427NM_006981
NR4A3hsa-miR-5692b95.6434NM_006981
NR4A3hsa-miR-5692c95.6434NM_006981
NR4A3hsa-miR-29a-5p95.4803NM_006981
NR4A3hsa-miR-651-3p95.1678NM_006981
NR4A3hsa-miR-2355-5p94.8152NM_006981
NR4A3hsa-miR-7-5p94.6358NM_006981
NR4A3hsa-miR-4797-5p94.0897NM_006981
NR4A3hsa-miR-6500-3p93.9737NM_006981
NR4A3hsa-miR-302e93.5827NM_006981
NR4A3hsa-miR-92a-3p93.5812NM_006981
NR4A3hsa-miR-32-5p93.5812NM_006981
NR4A3hsa-miR-367-3p93.5812NM_006981
NR4A3hsa-miR-363-3p93.5812NM_006981
NR4A3hsa-miR-92b-3p93.5812NM_006981
NR4A3hsa-miR-25-3p93.5812NM_006981
NR4A3hsa-miR-205393.2285NM_006981
NR4A3hsa-miR-130392.8535NM_173199
NR4A3hsa-miR-2116-5p92.8286NM_006981
NR4A3hsa-miR-64192.6585NM_006981
NR4A3hsa-miR-3617-5p92.6585NM_006981
NR4A3hsa-miR-383-3p91.7048NM_006981
NR4A3hsa-miR-6715b-3p91.618NM_006981
NR4A3hsa-miR-6782-3p91.6166NM_006981
NR4A3hsa-miR-3074-5p91.2996NM_006981
NR4A3hsa-miR-3145-3p90.9211NM_006981
NR4A3hsa-miR-3691-3p90.9006NM_006981
NR4A3hsa-miR-3613-3p90.844NM_006981
NR4A3hsa-miR-374a-5p90.7512NM_006981
NR4A3hsa-miR-6772-5p90.6209NM_006981
NR4A3hsa-miR-6504-5p90.5969NM_006981
NR4A3hsa-miR-374b-5p90.3947NM_006981
NR4A3hsa-miR-627-3p89.7353NM_006981
NR4A3hsa-miR-126489.7012NM_006981
NR4A3hsa-miR-7161-5p89.5796NM_006981
NR4A3hsa-miR-432588.9508NM_006981
NR4A3hsa-miR-6715a-3p88.94NM_006981
NR4A3hsa-miR-6777-3p88.8752NM_006981
NR4A3hsa-miR-367188.8623NM_006981
NR4A3hsa-miR-391088.7727NM_173199
NR4A3hsa-miR-4677-5p88.7255NM_006981
NR4A3hsa-miR-58788.6751NM_006981
NR4A3hsa-miR-5001-3p88.2985NM_006981
NR4A3hsa-miR-548az-5p88.1696NM_006981
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Motifs and transcription factors (TFs) regulating NR4A3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NR4A3jaspar__MA0604.1ATF1 (inferredBy_Orthology).
NR4A3taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
NR4A3metacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
NR4A3transfac_pro__M08803CREM (directAnnotation).
NR4A3kznf__ZNF613_Imbeault2017_RP_RCADEZNF613 (directAnnotation).
NR4A3transfac_pro__M01861ATF1 (directAnnotation).
NR4A3metacluster_2.6IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF1; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF2; IRF3; IRF3; IRF3; IRF3; IRF3; IRF3; IRF4; IRF4; IRF4; IRF4; IRF4; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF5; IRF6; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF7; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF8; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; IRF9; STAT1; STAT2; STAT2; STAT2; STAT2; ZNF426; ZNF71 (directAnnotation). IRF1; IRF1; IRF3; IRF8 (inferredBy_Orthology).
NR4A3transfac_pro__M00801ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM (directAnnotation). ATF7-NPFF (inferredBy_Orthology).
NR4A3tfdimers__MD00143IKZF1; MZF1 (directAnnotation).
NR4A3tfdimers__MD00026IRF1; MYB (directAnnotation).
NR4A3metacluster_111.5E4F1; E4F1 (directAnnotation).
NR4A3metacluster_167.7IRF8 (inferredBy_Orthology).
NR4A3metacluster_2.7IRF1; IRF1; IRF2; IRF2; IRF3; IRF4; IRF5; IRF6; IRF7; IRF7; IRF8; IRF8; IRF9; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; PRDM1; STAT1; STAT1; STAT2 (directAnnotation). PRDM1; PRDM1; PRDM1 (inferredBy_Orthology).
NR4A3cisbp__M04023CREB1 (directAnnotation).
NR4A3hdpi__CREB1CREB1 (directAnnotation).
NR4A3transfac_pro__M01239RELA (directAnnotation).
NR4A3taipale_tf_pairs__ERF_MAX_RSCGGAANCACGTGN_CAP_reprERF; MAX (directAnnotation).
NR4A3transfac_pro__M05397ZNF444 (directAnnotation).
NR4A3tfdimers__MD00031MYB; ZEB1 (directAnnotation).
NR4A3metacluster_5.1HIVEP1; HIVEP1; NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; NFKB2; NFKB2; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELA; RELB; RELB (directAnnotation). NFAT5; NFKB1; NFKB1; NFKB1; NFKB1; NFKB1; NFKB2; NFKB2; NFKB2; REL; REL; REL; REL; RELA; RELA; RELA; RELA; RELA; RELB; RELB; RELB (inferredBy_Orthology).
NR4A3transfac_pro__M05464SALL1 (directAnnotation).
NR4A3hdpi__NFATC3NFATC3 (directAnnotation).
NR4A3transfac_pro__M07981ATF3 (inferredBy_Orthology).
NR4A3c2h2_zfs__M0385MTF1 (inferredBy_Orthology).
NR4A3metacluster_103.2ZNF136; ZNF680 (directAnnotation).
NR4A3transfac_pro__M06375ZNF629 (inferredBy_Orthology).
NR4A3metacluster_190.8ILF2; NFAT5; NFAT5; NFAT5; NFAT5; NFATC1; NFATC2; NFATC3; NFATC4; NFATC4 (directAnnotation).
NR4A3kznf__ZNF25_Imbeault2017_RP_ChIP-seqZNF25 (directAnnotation).
NR4A3transfac_pro__M05419ZBTB45 (directAnnotation).
NR4A3transfac_pro__M01665IRF8 (directAnnotation).
NR4A3hdpi__RAB18RAB18 (directAnnotation).
NR4A3taipale_tf_pairs__ELK1_FOXI1_RSCGGAANRWMAACAN_CAP_reprELK1; FOXI1 (directAnnotation).
NR4A3metacluster_70.1POU5F1 (directAnnotation).
NR4A3kznf__CTCF_Rhee2011.3_ChIP-exoCTCF (directAnnotation).
NR4A3transfac_pro__M05574ZFP92 (directAnnotation).
NR4A3transfac_pro__M05550SNAPC4 (inferredBy_Orthology).
NR4A3transfac_pro__M01251E2F1 (directAnnotation).
NR4A3tfdimers__MD00321FLI1; ING4 (directAnnotation).
NR4A3metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
NR4A3taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
NR4A3taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
NR4A3transfac_pro__M07436WT1 (directAnnotation).
NR4A3taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
NR4A3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
NR4A3transfac_pro__M02089E2F3 (directAnnotation).
NR4A3metacluster_3.14WT1; WT1 (directAnnotation).
NR4A3transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
NR4A3transfac_pro__M04817ZBTB33 (directAnnotation).
NR4A3cisbp__M00968MTF2 (directAnnotation).
NR4A3taipale_cyt_meth__GCM1_RTGCGGGTN_eDBDGCM1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NR4A3"Dasatinib"

DB01254

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."