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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target

Gene: NR3C1

Summary for NR3C1

Gene informationGene symbol

NR3C1

Ensembl ID

ENSG00000113580

Entrez ID

2908

Gene namenuclear receptor subfamily 3 group C member 1
SynonymsGR|GRL
Gene typeprotein_coding
UniProtAcc

P04150


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Dataset with differentially expressed gene: NR3C1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.6539520.00e+00

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells0.338594.34e-12

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells-0.2694084.13e-05

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD4+ T cells-0.8077760.00e+00

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.3367320.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro-0.2550946.93e-04

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.329090.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3603480.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells-0.3965420.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.342930.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells0.522160.00e+00

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Expression of NR3C1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NR3C1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

NR3C1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating NR3C1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NR3C1hsa-miR-381-3p99.9317NM_001204259
NR3C1hsa-miR-4666a-3p99.9275NM_001204259
NR3C1hsa-miR-30099.9157NM_001204259
NR3C1hsa-miR-98-3p99.772NM_001204259
NR3C1hsa-miR-548e-5p99.7434NM_001204259
NR3C1hsa-let-7b-3p99.7388NM_001204259
NR3C1hsa-let-7f-1-3p99.7388NM_001204259
NR3C1hsa-let-7a-3p99.7388NM_001204259
NR3C1hsa-miR-1277-5p99.5311NM_001204259
NR3C1hsa-miR-204-5p99.0675NM_001204259
NR3C1hsa-miR-211-5p99.0675NM_001204259
NR3C1hsa-miR-5581-3p98.5224NM_001204259
NR3C1hsa-miR-1304-3p98.2885NM_001204264
NR3C1hsa-miR-570-3p97.7723NM_001204264
NR3C1hsa-miR-5692a97.4898NM_001204259
NR3C1hsa-miR-442097.4866NM_001204264
NR3C1hsa-miR-181b-3p97.3844NM_001204264
NR3C1hsa-miR-181b-2-3p97.3844NM_001204264
NR3C1hsa-miR-551b-5p97.2877NM_001204264
NR3C1hsa-miR-130397.021NM_001204259
NR3C1hsa-miR-4693-5p96.9576NM_001020825
NR3C1hsa-miR-5590-5p96.9234NM_001204259
NR3C1hsa-miR-364696.4713NM_001020825
NR3C1hsa-miR-7852-3p96.3782NM_001204259
NR3C1hsa-miR-54396.1474NM_001204264
NR3C1hsa-miR-4482-3p96.1172NM_001204259
NR3C1hsa-miR-6719-3p95.877NM_001204264
NR3C1hsa-miR-515-5p95.351NM_001204264
NR3C1hsa-miR-46694.9864NM_001204264
NR3C1hsa-miR-808794.43NM_001204265
NR3C1hsa-miR-339-3p94.3365NM_001020825
NR3C1hsa-miR-4646-5p94.2982NM_001204259
NR3C1hsa-miR-204-3p94.2982NM_001204259
NR3C1hsa-miR-6832-3p94.0173NM_001204259
NR3C1hsa-miR-619-5p93.8698NM_001204259
NR3C1hsa-miR-6506-5p93.8698NM_001204259
NR3C1hsa-miR-519e-5p93.4303NM_001204264
NR3C1hsa-miR-497-3p93.3619NM_001204264
NR3C1hsa-miR-653-3p93.2231NM_001204264
NR3C1hsa-miR-147a93.1833NM_001204259
NR3C1hsa-miR-3120-3p93.1703NM_001204259
NR3C1hsa-miR-467293.1304NM_001204264
NR3C1hsa-miR-471993.0304NM_001204259
NR3C1hsa-miR-509392.8134NM_001204265
NR3C1hsa-miR-548c-3p92.7807NM_001204259
NR3C1hsa-miR-1250-3p92.6997NM_001204264
NR3C1hsa-miR-467992.618NM_001020825
NR3C1hsa-miR-30a-3p91.8741NM_001204264
NR3C1hsa-miR-30e-3p91.8741NM_001204264
NR3C1hsa-miR-30d-3p91.8741NM_001204264
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Motifs and transcription factors (TFs) regulating NR3C1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NR3C1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
NR3C1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
NR3C1transfac_pro__M07397ZNF148 (directAnnotation).
NR3C1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
NR3C1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
NR3C1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
NR3C1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
NR3C1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
NR3C1metacluster_7.13ZFX (directAnnotation).
NR3C1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
NR3C1homer__GGGGGGGG_MazMAZ (directAnnotation).
NR3C1transfac_pro__M01175ZBTB7B (directAnnotation).
NR3C1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
NR3C1tfdimers__MD00151CHURC1 (directAnnotation).
NR3C1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
NR3C1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
NR3C1transfac_pro__M01303SP1 (directAnnotation).
NR3C1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
NR3C1swissregulon__hs__CHD1CHD1 (directAnnotation).
NR3C1transfac_pro__M02090E2F4 (directAnnotation).
NR3C1transfac_pro__M01714KLF15 (directAnnotation).
NR3C1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
NR3C1jaspar__MA1122.1TFDP1 (directAnnotation).
NR3C1hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
NR3C1transfac_pro__M02089E2F3 (directAnnotation).
NR3C1transfac_pro__M12604ZNF444 (directAnnotation).
NR3C1metacluster_3.14WT1; WT1 (directAnnotation).
NR3C1metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
NR3C1metacluster_126.3LIN28B; LIN28B (directAnnotation).
NR3C1hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
NR3C1hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
NR3C1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
NR3C1cisbp__M07938E2F1 (directAnnotation).
NR3C1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
NR3C1transfac_pro__M07436WT1 (directAnnotation).
NR3C1transfac_pro__M02281SP1 (directAnnotation).
NR3C1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
NR3C1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
NR3C1metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
NR3C1transfac_pro__M02898SMAD3 (directAnnotation).
NR3C1transfac_public__M00491PATZ1 (directAnnotation).
NR3C1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
NR3C1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
NR3C1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
NR3C1taipale_tf_pairs__ETV2_HES7_NNCACGTGNNNNNCGGAWRY_CAP_reprETV2; HES7 (directAnnotation).
NR3C1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
NR3C1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
NR3C1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
NR3C1cisbp__M08198ELF1 (directAnnotation).
NR3C1transfac_pro__M00652NRF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
NR3C1metacluster_141.5upMalignant cells

GSE138267

NA
NR3C1metacluster_141.5upCD4+ T cells

GSE169246_PacTissue

pre
NR3C1metacluster_141.5downMalignant cells

GSE199333

post
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NR3C1"Alclometasone"

DB00240

small molecule
NR3C1"Aldosterone"

DB04630

small molecule
NR3C1"Amcinonide"

DB00288

small molecule
NR3C1"Beclomethasone dipropionate"

DB00394

small molecule
NR3C1"Betamethasone phosphate"

DB14669

small molecule
NR3C1"Betamethasone"

DB00443

small molecule
NR3C1"Budesonide"

DB01222

small molecule
NR3C1"Ciclesonide"

DB01410

small molecule
NR3C1"Clobetasol propionate"

DB01013

small molecule
NR3C1"Clobetasone"

DB13158

small molecule
NR3C1"Clocortolone"

DB00838

small molecule
NR3C1"Cortisone acetate"

DB01380

small molecule
NR3C1"Cortivazol"

DB13003

small molecule
NR3C1"Deflazacort"

DB11921

small molecule
NR3C1"Desonide"

DB01260

small molecule
NR3C1"Desoximetasone"

DB00547

small molecule
NR3C1"Dexamethasone acetate"

DB14649

small molecule
NR3C1"Dexamethasone"

DB01234

small molecule
NR3C1"Diflorasone"

DB00223

small molecule
NR3C1"Difluocortolone"

DB09095

small molecule
NR3C1"Difluprednate"

DB06781

small molecule
NR3C1"Drospirenone"

DB01395

small molecule
NR3C1"Fludrocortisone"

DB00687

small molecule
NR3C1"Flumethasone"

DB00663

small molecule
NR3C1"Flunisolide"

DB00180

small molecule
NR3C1"Fluocinolone acetonide"

DB00591

small molecule
NR3C1"Fluocinonide"

DB01047

small molecule
NR3C1"Fluorometholone"

DB00324

small molecule
NR3C1"Fluoxymesterone"

DB01185

small molecule
NR3C1"Flurandrenolide"

DB00846

small molecule
NR3C1"Fluticasone furoate"

DB08906

small molecule
NR3C1"Fluticasone propionate"

DB00588

small molecule
NR3C1"Fluticasone"

DB13867

small molecule
NR3C1"Gestrinone"

DB11619

small molecule
NR3C1"Hexane-1,6-Diol"

DB02210

small molecule
NR3C1"Hydrocortamate"

DB00769

small molecule
NR3C1"Hydrocortisone aceponate"

DB14538

small molecule
NR3C1"Hydrocortisone acetate"

DB14539

small molecule
NR3C1"Hydrocortisone butyrate"

DB14540

small molecule
NR3C1"Hydrocortisone cypionate"

DB14541

small molecule
NR3C1"Hydrocortisone phosphate"

DB14542

small molecule
NR3C1"Hydrocortisone probutate"

DB14543

small molecule
NR3C1"Hydrocortisone valerate"

DB14544

small molecule
NR3C1"Hydrocortisone"

DB00741

small molecule
NR3C1"Levonorgestrel"

DB00367

small molecule
NR3C1"Loteprednol etabonate"

DB14596

small molecule
NR3C1"Medrysone"

DB00253

small molecule
NR3C1"Megestrol acetate"

DB00351

small molecule
NR3C1"Methylprednisolone"

DB00959

small molecule
NR3C1"Mifepristone"

DB00834

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."