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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: NQO1

Summary for NQO1

Gene informationGene symbol

NQO1

Ensembl ID

ENSG00000181019

Entrez ID

1728

Gene nameNAD(P)H quinone dehydrogenase 1
SynonymsDHQU|DIA4|DTD|NMOR1|QR1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: NQO1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5038130.00e+00

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells-0.440460.00e+00

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.7710122.50e-04

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.4149431.80e-12

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.7574440.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.6906140.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.6166141.42e-23

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.6532438.06e-35

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.5240010.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-1.783020.00e+00

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells-0.7124180.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.4613070.00e+00

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Expression of NQO1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NQO1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

NQO1

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating NQO1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NQO1hsa-miR-6833-5p97.6087NM_001286137
NQO1hsa-miR-390893.9179NM_001286137
NQO1hsa-miR-445293.7529NM_000903
NQO1hsa-miR-1912-3p93.0168NM_001286137
NQO1hsa-miR-510092.421NM_001286137
NQO1hsa-miR-475289.9313NM_001286137
NQO1hsa-miR-1295b-5p89.87NM_001286137
NQO1hsa-miR-217-3p89.5396NM_001286137
NQO1hsa-miR-61789.3357NM_001286137
NQO1hsa-miR-5197-3p88.7411NM_001286137
NQO1hsa-miR-6892-3p87.6038NM_001286137
NQO1hsa-miR-313387.0058NM_001286137
NQO1hsa-miR-605-3p86.9611NM_001286137
NQO1hsa-miR-4659a-5p86.7047NM_001286137
NQO1hsa-miR-4659b-5p86.7047NM_001286137
NQO1hsa-miR-548l85.5453NM_001286137
NQO1hsa-miR-6735-5p85.501NM_000903
NQO1hsa-miR-4436b-3p85.501NM_000903
NQO1hsa-miR-6879-5p85.501NM_000903
NQO1hsa-miR-10397-3p83.8278NM_001286137
NQO1hsa-miR-118483.3371NM_001286137
NQO1hsa-miR-7843-5p83.2092NM_000903
NQO1hsa-miR-4632-5p83.2092NM_000903
NQO1hsa-miR-568082.9889NM_001286137
NQO1hsa-miR-539-5p82.5944NM_000903
NQO1hsa-miR-18b-3p82.1013NM_001286137
NQO1hsa-miR-6499-3p80.6077NM_001286137
NQO1hsa-miR-5088-3p80.0505NM_001286137
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Motifs and transcription factors (TFs) regulating NQO1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NQO1metacluster_70.16POU5F1; POU5F1 (directAnnotation).
NQO1metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
NQO1metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
NQO1metacluster_22.12NFE2; NFE2L1 (directAnnotation).
NQO1metacluster_22.25NFE2L2 (directAnnotation).
NQO1metacluster_30.4BACH1; BACH1; MAFG; MAFG; NFE2; NFE2; NFE2L1; NFE2L1; NFE2L2 (directAnnotation).
NQO1metacluster_22.29NFE2 (directAnnotation).
NQO1metacluster_22.32NFE2L2 (directAnnotation).
NQO1metacluster_22.17NFE2 (directAnnotation).
NQO1metacluster_22.21NFE2L2 (inferredBy_Orthology).
NQO1metacluster_22.37BACH1 (directAnnotation).
NQO1metacluster_22.11NFE2 (directAnnotation).
NQO1metacluster_22.16BACH2 (directAnnotation).
NQO1metacluster_22.39NFE2L2 (directAnnotation).
NQO1metacluster_22.13MAFK (inferredBy_Orthology).
NQO1metacluster_22.20MAFG (directAnnotation).
NQO1metacluster_22.34BACH2 (directAnnotation).
NQO1metacluster_22.1MAFF (inferredBy_Orthology).
NQO1metacluster_22.18BACH2 (inferredBy_Orthology).
NQO1metacluster_155.30ZNF254 (directAnnotation).
NQO1transfac_pro__M05399SCRT2 (inferredBy_Orthology).
NQO1taipale_tf_pairs__E2F3_DRGX_SGCGCTAATTKN_CAP_reprDRGX; E2F3 (directAnnotation).
NQO1metacluster_26.2ZNF264 (directAnnotation). NKX2-8 (inferredBy_Orthology).
NQO1transfac_public__M00040ATF2 (directAnnotation).
NQO1metacluster_153.3SOX10; SOX10; SOX18; SOX8; SOX8; SOX9; SOX9 (directAnnotation).
NQO1metacluster_70.23POU3F4 (directAnnotation).
NQO1metacluster_156.4NFIL3 (directAnnotation). NFIL3 (inferredBy_Orthology).
NQO1metacluster_70.19POU1F1 (directAnnotation).
NQO1metacluster_70.22POU3F2 (directAnnotation).
NQO1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
NQO1taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
NQO1cisbp__M02645ETS1 (directAnnotation).
NQO1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
NQO1metacluster_22.15BACH1 (directAnnotation).
NQO1metacluster_22.14BACH1 (inferredBy_Orthology).
NQO1metacluster_22.28BACH1 (directAnnotation).
NQO1metacluster_22.19NFE2 (directAnnotation).
NQO1metacluster_22.36BACH2 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NQO1"3-(HYDROXYMETHYL)-1-METHYL-5-(2-METHYLAZIRIDIN-1-YL)-2-PHENYL-1H-INDOLE-4,7-DIONE"

DB07385

small molecule
NQO1"3-Hydroxymethyl-5-Aziridinyl-1methyl-2-[1h-Indole-4,7-Dione]-Propanol"

DB02395

small molecule
NQO1"5-Methoxy-1,2-Dimethyl-3-(Phenoxymethyl)Indole-4,7-Dione"

DB03626

small molecule
NQO1"Bishydroxy[2h-1-Benzopyran-2-One,1,2-Benzopyrone]"

DB04392

small molecule
NQO1"Cannabidiol"

DB09061

small molecule
NQO1"Cibacron Blue"

DB02633

small molecule
NQO1"Dicoumarol"

DB00266

small molecule
NQO1"Duroquinone"

DB01927

small molecule
NQO1"ES-936"

DB02400

small molecule
NQO1"Flavin adenine dinucleotide"

DB03147

small molecule
NQO1"Menadione"

DB00170

small molecule
NQO1"RH-1"

DB04090

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."