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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NPL

Summary for NPL

Gene informationGene symbol

NPL

Ensembl ID

ENSG00000135838

Entrez ID

80896

Gene nameN-acetylneuraminate pyruvate lyase
SynonymsC1orf13|DHDPS1|NPL1
Gene typeprotein_coding
UniProtAcc

Q9BXD5


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Dataset with differentially expressed gene: NPL

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro0.2833023.34e-28

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.6335893.43e-14

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.3221462.23e-12

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes0.2651980.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreErythrocytes0.3673276.66e-24

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Expression of NPL in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NPL

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NPL

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NPLhsa-miR-431996.6334NM_001200052
NPLhsa-miR-125b-5p96.257NM_001200052
NPLhsa-miR-125a-5p96.257NM_001200052
NPLhsa-miR-364693.0677NM_030769
NPLhsa-miR-509492.6966NM_001200052
NPLhsa-miR-315491.8289NM_001200051
NPLhsa-miR-467291.7536NM_001200051
NPLhsa-miR-428487.602NM_030769
NPLhsa-miR-684487.1127NM_030769
NPLhsa-miR-6857-3p86.9936NM_030769
NPLhsa-miR-477586.9648NM_001200051
NPLhsa-miR-383-3p85.994NM_001200052
NPLhsa-miR-590-3p85.6637NM_001200051
NPLhsa-miR-430684.9273NM_030769
NPLhsa-miR-3679-5p84.9192NM_001200051
NPLhsa-miR-323a-3p83.2692NM_001200051
NPLhsa-miR-539-5p82.637NM_001200052
NPLhsa-miR-1185-5p82.4166NM_001200051
NPLhsa-miR-140-5p82.2247NM_030769
NPLhsa-miR-6732-3p81.2901NM_030769
NPLhsa-miR-670-5p80.6632NM_001200052
NPLhsa-miR-510-3p80.2629NM_030769
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Motifs and transcription factors (TFs) regulating NPL

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NPLtransfac_pro__M06104ZNF16 (directAnnotation).
NPLtaipale_tf_pairs__ETV2_HES7_RSCGGAANNNNNNCACGTGNN_CAP_reprETV2; HES7 (directAnnotation).
NPLmetacluster_38.1ETV7; ETV7; STAT1; STAT1; STAT1; STAT1; STAT1; STAT1; STAT1; STAT1; STAT1; STAT1; STAT3; STAT3; STAT3; STAT3; STAT3; STAT3; STAT3; STAT3; STAT3; STAT4; STAT5A; STAT5B (directAnnotation). STAT1; STAT3; STAT3; STAT4; STAT5A; STAT5A; STAT5B; STAT5B; STAT6; STAT6 (inferredBy_Orthology).
NPLtransfac_pro__M06881ZNF549 (directAnnotation).
NPLtransfac_pro__M01968FOXO1 (directAnnotation).
NPLmetacluster_135.11NR2C2 (directAnnotation).
NPLtaipale_tf_pairs__GCM2_HES7_RTRNKGGTNNNGCACGYGNN_CAP_reprGCM2; HES7 (directAnnotation).
NPLmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
NPLtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
NPLmetacluster_198.7AHR; ZBTB14; ZBTB14; ZBTB14 (directAnnotation).
NPLtaipale_tf_pairs__ETV5_TCF3_RNCGGAAGNNNNNCASSTGN_CAP_reprETV5; TCF3 (directAnnotation).
NPLmetacluster_22.13MAFK (inferredBy_Orthology).
NPLtransfac_pro__M06402ZNF493 (directAnnotation).
NPLtfdimers__MD00029IKZF2; NKX3-2 (directAnnotation).
NPLmetacluster_155.35FIZ1; ZNF322 (directAnnotation). ZNF322 (inferredBy_Orthology).
NPLtfdimers__MD00208IRF1; LTF (directAnnotation).
NPLmetacluster_29.2BCL6; IRF3; IRF3; STAT1; STAT1; STAT1; STAT2; STAT3; STAT3; STAT3; STAT4; STAT4; STAT5A; STAT5A; STAT5A; STAT5A; STAT5B; STAT5B; STAT5B; STAT6 (directAnnotation). STAT3; STAT5A; STAT5A; STAT5A; STAT5A; STAT5A; STAT5B; STAT5B; STAT6; STAT6 (inferredBy_Orthology).
NPLtransfac_pro__M08190AR (directAnnotation).
NPLtransfac_pro__M02012HIF1A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."