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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NIPAL4

Summary for NIPAL4

Gene informationGene symbol

NIPAL4

Ensembl ID

ENSG00000172548

Entrez ID

348938

Gene nameNIPA like domain containing 4
SynonymsICHYN|SLC57A6
Gene typeprotein_coding
UniProtAcc

Q0D2K0


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Dataset with differentially expressed gene: NIPAL4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.915071.92e-02

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Expression of NIPAL4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NIPAL4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NIPAL4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NIPAL4hsa-miR-431997.6391NM_001099287
NIPAL4hsa-miR-125b-5p97.2454NM_001099287
NIPAL4hsa-miR-125a-5p97.2454NM_001099287
NIPAL4hsa-miR-202-3p95.9405NM_001099287
NIPAL4hsa-miR-196a-1-3p95.7007NM_001172292
NIPAL4hsa-miR-450095.476NM_001099287
NIPAL4hsa-miR-426295.0536NM_001099287
NIPAL4hsa-miR-3190-5p94.8195NM_001099287
NIPAL4hsa-let-7c-5p94.634NM_001099287
NIPAL4hsa-let-7b-5p94.634NM_001099287
NIPAL4hsa-let-7i-5p94.634NM_001099287
NIPAL4hsa-miR-98-5p94.634NM_001099287
NIPAL4hsa-let-7a-5p94.634NM_001099287
NIPAL4hsa-let-7e-5p94.634NM_001099287
NIPAL4hsa-let-7g-5p94.634NM_001099287
NIPAL4hsa-let-7f-5p94.634NM_001099287
NIPAL4hsa-miR-998594.0487NM_001099287
NIPAL4hsa-miR-27a-3p94.0487NM_001099287
NIPAL4hsa-miR-27b-3p94.0487NM_001099287
NIPAL4hsa-let-7d-5p93.2962NM_001099287
NIPAL4hsa-miR-445893.2962NM_001099287
NIPAL4hsa-miR-513c-5p92.5387NM_001172292
NIPAL4hsa-miR-514b-5p92.5387NM_001172292
NIPAL4hsa-miR-181c-5p92.3452NM_001099287
NIPAL4hsa-miR-181a-5p92.3452NM_001099287
NIPAL4hsa-miR-181d-5p92.3452NM_001099287
NIPAL4hsa-miR-181b-5p92.3452NM_001099287
NIPAL4hsa-miR-3180-5p91.2195NM_001099287
NIPAL4hsa-miR-3663-3p88.1326NM_001172292
NIPAL4hsa-miR-4747-5p87.7921NM_001172292
NIPAL4hsa-miR-5196-5p87.7921NM_001172292
NIPAL4hsa-miR-317687.2437NM_001099287
NIPAL4hsa-miR-4732-3p86.8481NM_001099287
NIPAL4hsa-miR-345-3p86.8481NM_001099287
NIPAL4hsa-miR-3922-3p86.4169NM_001099287
NIPAL4hsa-miR-548s85.7282NM_001172292
NIPAL4hsa-miR-670-5p85.5624NM_001099287
NIPAL4hsa-miR-448785.0354NM_001172292
NIPAL4hsa-miR-4778-3p84.2566NM_001099287
NIPAL4hsa-miR-221-3p83.6261NM_001099287
NIPAL4hsa-miR-222-3p83.6261NM_001099287
NIPAL4hsa-miR-445083.1782NM_001172292
NIPAL4hsa-miR-513a-5p82.022NM_001099287
NIPAL4hsa-miR-33b-5p81.9184NM_001099287
NIPAL4hsa-miR-33a-5p81.9184NM_001099287
NIPAL4hsa-miR-453381.535NM_001172292
NIPAL4hsa-miR-5587-5p80.714NM_001099287
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Motifs and transcription factors (TFs) regulating NIPAL4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."