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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: NEK2

Summary for NEK2

Gene informationGene symbol

NEK2

Ensembl ID

ENSG00000117650

Entrez ID

4751

Gene nameNIMA related kinase 2
SynonymsNEK2A|NLK1|PPP1R111|RP67
Gene typeprotein_coding
UniProtAcc

P51955


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Dataset with differentially expressed gene: NEK2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-1.051084.11e-04

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.276967.13e-15

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3286480.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.264446.27e-27

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Expression of NEK2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NEK2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NEK2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NEK2hsa-miR-491-3p95.1407NM_001204182
NEK2hsa-miR-7106-5p93.9766NM_001204182
NEK2hsa-miR-128-3p93.7214NM_002497
NEK2hsa-miR-216a-3p93.7214NM_002497
NEK2hsa-miR-4727-3p93.204NM_002497
NEK2hsa-miR-370-5p92.284NM_001204182
NEK2hsa-miR-616-5p90.9774NM_001204183
NEK2hsa-miR-373-5p90.9774NM_001204183
NEK2hsa-miR-371b-5p90.9774NM_001204183
NEK2hsa-miR-2116-5p90.8427NM_002497
NEK2hsa-miR-3681-3p90.7006NM_002497
NEK2hsa-miR-4666a-5p90.6554NM_001204182
NEK2hsa-miR-18b-3p90.4641NM_001204183
NEK2hsa-miR-499b-5p89.1866NM_002497
NEK2hsa-miR-3157-3p88.6618NM_001204183
NEK2hsa-miR-4677-5p87.907NM_002497
NEK2hsa-miR-1212387.6387NM_001204182
NEK2hsa-miR-629-3p87.2789NM_002497
NEK2hsa-miR-4713-5p87.1526NM_002497
NEK2hsa-miR-431787.0663NM_001204183
NEK2hsa-miR-607486.7469NM_001204183
NEK2hsa-miR-3074-3p85.2219NM_001204182
NEK2hsa-miR-315385.1348NM_002497
NEK2hsa-miR-182785.0009NM_001204183
NEK2hsa-miR-146a-3p82.6737NM_001204183
NEK2hsa-miR-548ag81.6206NM_001204183
NEK2hsa-miR-548ai81.6206NM_001204183
NEK2hsa-miR-548ba81.6206NM_001204183
NEK2hsa-miR-570-5p81.6206NM_001204183
NEK2hsa-miR-6501-3p81.4029NM_002497
NEK2hsa-miR-431081.3853NM_002497
NEK2hsa-miR-6817-3p80.6625NM_001204183
NEK2hsa-miR-426480.0732NM_002497
NEK2hsa-miR-499a-3p80.0386NM_002497
NEK2hsa-miR-499b-3p80.0386NM_002497
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Motifs and transcription factors (TFs) regulating NEK2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NEK2metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
NEK2metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
NEK2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
NEK2metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NEK2"5-[(Z)-(5-Chloro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-N,2,4-trimethyl-1H-pyrrole-3-carboxam

DB07180

small molecule
NEK2"Fostamatinib"

DB12010

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."