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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NECTIN2

Summary for NECTIN2

Gene informationGene symbol

NECTIN2

Ensembl ID

ENSG00000130202

Entrez ID

5819

Gene namenectin cell adhesion molecule 2
SynonymsCD112|HVEB|Nectin-2|PRR2|PVRL2|PVRR2
Gene typeprotein_coding
UniProtAcc

Q92692


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Dataset with differentially expressed gene: NECTIN2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs0.2513985.92e-04

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMono/Macro0.2910493.31e-04

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.3158423.97e-16

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4451470.00e+00

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Expression of NECTIN2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NECTIN2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)
Gene symbolCell type with DEGInteraction IDInteracting pairGene AGene BIntegrinInteracting cell type1Interacting cell type2DatasetTimepointCondition
NECTIN2cDCsCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalsecDCsCD4+ T cells

GSE169246_PacTissue

postresistant
NECTIN2cDCsCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalsecDCsCD8+ T cells

GSE169246_PacTissue

postresistant
NECTIN2cDCsCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalsecDCsNK cells

GSE169246_PacTissue

postresistant
NECTIN2Mono/MacroCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalseMono/MacroCD4+ T cells

GSE207422_Sin

postresistant
NECTIN2Mono/MacroCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalseMono/MacroCD8+ T cells

GSE207422_Sin

postresistant
NECTIN2Malignant cellsCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalseMalignant cellsCD4+ T cells

GSE207422_Tor

postresistant
NECTIN2Malignant cellsCPI-SS0E14458C9NECTIN2_TIGITNECTIN2TIGITFalseMalignant cellsCD8+ T cells

GSE207422_Tor

postresistant
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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NECTIN2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NECTIN2hsa-miR-806594.5544NM_001042724
NECTIN2hsa-miR-1212492.1163NM_001042724
NECTIN2hsa-miR-450a-2-3p91.0735NM_001042724
NECTIN2hsa-miR-397390.5595NM_001042724
NECTIN2hsa-miR-222-5p89.8923NM_001042724
NECTIN2hsa-miR-3189-3p86.2576NM_001042724
NECTIN2hsa-miR-6747-3p86.1439NM_001042724
NECTIN2hsa-miR-211085.3388NM_001042724
NECTIN2hsa-miR-509384.2868NM_001042724
NECTIN2hsa-miR-450b-3p84.099NM_001042724
NECTIN2hsa-miR-6893-5p82.5901NM_001042724
NECTIN2hsa-miR-199a-3p82.4103NM_001042724
NECTIN2hsa-miR-3129-5p82.4103NM_001042724
NECTIN2hsa-miR-199b-3p82.4103NM_001042724
NECTIN2hsa-miR-4764-3p81.6799NM_002856
NECTIN2hsa-miR-520g-3p81.3893NM_001042724
NECTIN2hsa-miR-520h81.3893NM_001042724
NECTIN2hsa-miR-769-3p80.8641NM_001042724
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Motifs and transcription factors (TFs) regulating NECTIN2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NECTIN2taipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_1SPIB; TEAD4 (directAnnotation).
NECTIN2taipale_tf_pairs__TEAD4_SPIB_RGAATGCGGAAGTN_CAP_2SPIB; TEAD4 (directAnnotation).
NECTIN2taipale_tf_pairs__TEAD4_SPDEF_RGWATSCGGATGNNNNTCCKNNN_CAP_reprSPDEF; TEAD4 (directAnnotation).
NECTIN2metacluster_155.29ZNF2 (directAnnotation). ZNF2 (inferredBy_Orthology).
NECTIN2metacluster_141.2E2F2; E2F3 (directAnnotation).
NECTIN2metacluster_70.16POU5F1; POU5F1 (directAnnotation).
NECTIN2tfdimers__MD00014ARID3A; KLF4 (directAnnotation).
NECTIN2metacluster_150.4SKOR1; SKOR1; SKOR2; SKOR2 (directAnnotation).
NECTIN2jaspar__MA1106.1HIF1A (directAnnotation).
NECTIN2metacluster_119.2CCNT2; GATA1; GATA1; GATA1; GATA1; GATA2; GATA2; GATA2; NCOA1; TAL1; TAL1; TAL1; TAL1; ZNF823 (directAnnotation). GATA1; TAL1; TAL1; TAL1; TAL1 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."