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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NECAB1

Summary for NECAB1

Gene informationGene symbol

NECAB1

Ensembl ID

ENSG00000123119

Entrez ID

64168

Gene nameN-terminal EF-hand calcium binding protein 1
SynonymsEFCBP1
Gene typeprotein_coding
UniProtAcc

Q8N987


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Dataset with differentially expressed gene: NECAB1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells-0.2901264.14e-18

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Expression of NECAB1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NECAB1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NECAB1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NECAB1hsa-miR-848599.7085NM_022351
NECAB1hsa-miR-493-5p98.9681NM_022351
NECAB1hsa-miR-576-5p98.3097NM_022351
NECAB1hsa-miR-365897.776NM_022351
NECAB1hsa-miR-186-5p95.2759NM_022351
NECAB1hsa-miR-580-3p95.0794NM_022351
NECAB1hsa-miR-335-3p94.912NM_022351
NECAB1hsa-miR-514b-5p94.662NM_022351
NECAB1hsa-miR-372-5p93.8378NM_022351
NECAB1hsa-miR-570193.4203NM_022351
NECAB1hsa-miR-513c-5p93.3039NM_022351
NECAB1hsa-miR-5579-5p93.3012NM_022351
NECAB1hsa-miR-428293.2653NM_022351
NECAB1hsa-miR-205492.9926NM_022351
NECAB1hsa-miR-3606-5p91.5436NM_022351
NECAB1hsa-miR-4520-2-3p90.4816NM_022351
NECAB1hsa-miR-6505-5p90.4421NM_022351
NECAB1hsa-let-7c-3p90.4221NM_022351
NECAB1hsa-miR-18a-3p90.1115NM_022351
NECAB1hsa-miR-477589.8363NM_022351
NECAB1hsa-miR-313389.1972NM_022351
NECAB1hsa-miR-477388.4758NM_022351
NECAB1hsa-miR-568387.7358NM_022351
NECAB1hsa-let-7a-2-3p87.5211NM_022351
NECAB1hsa-miR-590-3p87.3533NM_022351
NECAB1hsa-miR-329-5p87.0839NM_022351
NECAB1hsa-miR-27b-3p86.5827NM_022351
NECAB1hsa-miR-998586.5827NM_022351
NECAB1hsa-miR-27a-3p86.5827NM_022351
NECAB1hsa-miR-56285.2136NM_022351
NECAB1hsa-let-7g-3p85.1328NM_022351
NECAB1hsa-miR-6500-3p84.9087NM_022351
NECAB1hsa-miR-57184.7001NM_022351
NECAB1hsa-miR-3942-3p83.168NM_022351
NECAB1hsa-miR-520f-5p83.0153NM_022351
NECAB1hsa-miR-3074-5p82.759NM_022351
NECAB1hsa-miR-316882.3523NM_022351
NECAB1hsa-miR-942-5p82.1417NM_022351
NECAB1hsa-miR-316381.933NM_022351
NECAB1hsa-miR-1245b-3p81.7372NM_022351
NECAB1hsa-miR-1277-5p81.631NM_022351
NECAB1hsa-miR-181b-2-3p81.0218NM_022351
NECAB1hsa-miR-442081.0218NM_022351
NECAB1hsa-miR-181b-3p81.0218NM_022351
NECAB1hsa-miR-6504-3p80.9298NM_022351
NECAB1hsa-miR-10399-5p80.5288NM_022351
NECAB1hsa-miR-664a-3p80.326NM_022351
NECAB1hsa-miR-426180.2994NM_022351
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Motifs and transcription factors (TFs) regulating NECAB1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NECAB1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
NECAB1transfac_pro__M06534ZNF563 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."