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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene (This gene does not contain this module)

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: NDUFB1

Summary for NDUFB1

Gene informationGene symbol

NDUFB1

Ensembl ID

ENSG00000183648

Entrez ID

4707

Gene nameNADH:ubiquinone oxidoreductase subunit B1
SynonymsCI-MNLL|MNLL
Gene typeprotein_coding
UniProtAcc

O75438


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Dataset with differentially expressed gene: NDUFB1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.4454770.00e+00

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.3913112.41e-26

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostPlasma cells-0.4020344.60e-03

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostcDCs-0.4229233.69e-06

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro-0.5044460.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprepDCs-0.4039624.79e-02

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprePlasma cells-0.4010671.15e-03

GSE169246_PacTissue

patientsTumor tissueBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs0.5410172.39e-04

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3340342.69e-23

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro0.5935010.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostcDCs0.4008552.54e-09

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelprecDCs-0.3485811.34e-06

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro-0.288991.11e-11

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes-0.3424594.07e-22

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells0.2989110.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro0.3877890.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes-0.3184112.42e-24

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMono/Macro0.3111654.46e-22

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells-0.4609193.00e-20

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepreMalignant cells0.3003416.78e-08

GSE162117

patientsPeripheral blood mononuclear cellsAcute myeloid leukemiaTefractory acute myeloid leukemia (AML)Targeted therapyficlatuzumabpreB cells0.6582112.16e-03

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells0.4135920.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.25170.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells0.4256130.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.3434931.95e-33

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2792491.13e-11

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.3276492.80e-23

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMono/Macro0.2581911.79e-16

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreCD4+ T cells0.2579953.46e-04

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells0.2800921.78e-08

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.4962120.00e+00

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Expression of NDUFB1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NDUFB1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NDUFB1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)

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Motifs and transcription factors (TFs) regulating NDUFB1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NDUFB1transfac_pro__M01182HINFP (directAnnotation).
NDUFB1transfac_pro__M04862NRF1 (directAnnotation).
NDUFB1cisbp__M02645ETS1 (directAnnotation).
NDUFB1hdpi__ETV4ETV4 (directAnnotation).
NDUFB1transfac_pro__M01298MECP2 (directAnnotation).
NDUFB1tfdimers__MD00581ATF5; NKX3-2 (directAnnotation).
NDUFB1transfac_pro__M06717ZKSCAN7 (directAnnotation).
NDUFB1transfac_pro__M05815ZNF613 (directAnnotation).
NDUFB1transfac_pro__M05982ZFP14 (directAnnotation).
NDUFB1jaspar__MA1532.2NR1D2 (directAnnotation).
NDUFB1transfac_pro__M06830ZNF528 (directAnnotation).
NDUFB1tfdimers__MD00515ARID3A; KLF4 (directAnnotation).
NDUFB1kznf__ZNF737_Imbeault2017_OM_MEMEZNF737 (directAnnotation).
NDUFB1dbtfbs__ZNF577_HEK293_ENCSR776MDR_Rep2_N1ZNF577 (directAnnotation).
NDUFB1taipale_tf_pairs__ERF_DLX3_RSCGGAANNNNYAATTA_CAP_reprDLX3; ERF (directAnnotation).
NDUFB1hocomoco__HSFY1_HUMAN.H11MO.0.DHSFY1; HSFY2 (directAnnotation).
NDUFB1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_reprZNF385D (directAnnotation).
NDUFB1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
NDUFB1kznf__ZNF384_Schmitges2016_RCADEZNF384 (directAnnotation).
NDUFB1transfac_pro__M04706RELA (directAnnotation).
NDUFB1transfac_pro__M05538ZNF536 (inferredBy_Orthology).
NDUFB1metacluster_141.6MZF1; TAF1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZFP42; ZNF597 (directAnnotation). TAF1; TAF1L (inferredBy_Orthology).
NDUFB1jaspar__MA0748.2YY2 (directAnnotation).
NDUFB1dbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
NDUFB1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
NDUFB1hdpi__TIMELESSTIMELESS (directAnnotation).
NDUFB1taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
NDUFB1transfac_pro__M04918EGR1 (directAnnotation).
NDUFB1transfac_pro__M04794TAF1 (directAnnotation).
NDUFB1transfac_pro__M00492STAT1 (directAnnotation).
NDUFB1metacluster_132.4MEF2B; MEF2B; MEF2B; MEF2B; MEF2C; MEF2C; MEF2D; MEF2D; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF (directAnnotation). SRF; SRF; SRF; SRF (inferredBy_Orthology).
NDUFB1hdpi__ELF2ELF2 (directAnnotation).
NDUFB1swissregulon__hs__ELK1ELK1 (directAnnotation).
NDUFB1metacluster_183.4ETS1 (inferredBy_Orthology).
NDUFB1transfac_pro__M06969EBF4 (inferredBy_Orthology).
NDUFB1transfac_pro__M04906SIN3A (directAnnotation).
NDUFB1taipale_tf_pairs__GCM1_FOXI1_RTMAACATRNGGGN_CAP_reprFOXI1; GCM1 (directAnnotation).
NDUFB1transfac_pro__M04868EP300 (directAnnotation).
NDUFB1stark__YGATACSIX1 (inferredBy_Orthology).
NDUFB1transfac_pro__M06295ZNF667 (inferredBy_Orthology).
NDUFB1tfdimers__MD00218ATF1; ATF2; ATF3; ATF4; ATF7; CREB1; CREM; ELF1 (directAnnotation).
NDUFB1tfdimers__MD00299ETS1; SRY (directAnnotation).
NDUFB1transfac_pro__M06312ZNF79 (directAnnotation).
NDUFB1transfac_pro__M05822ZNF546 (directAnnotation).
NDUFB1metacluster_162.4NR1D1; NR1D1; NR1D1; NR1D1; NR1D2; NR1D2; NR2F6; RORA; RORB; RORB; RORC; RORC (directAnnotation).
NDUFB1metacluster_82.4ZFP30 (directAnnotation).
NDUFB1transfac_pro__M06799ZSCAN12 (directAnnotation).
NDUFB1taipale_tf_pairs__GCM2_ONECUT2_RTRCGGGNNNNNNATCRATN_CAP_reprGCM2; ONECUT2 (directAnnotation).
NDUFB1metacluster_9.39BARX1 (directAnnotation).
NDUFB1taipale_tf_pairs__CUX1_NHLH1_NNCAGCTGNNNNNNNNNATYGATN_CAP_reprCUX1; NHLH1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
NDUFB1"NADH"

DB00157

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."