Dataset | Source | Tissue | Cancer type level1 | Cancer type level2 | Drug type | Regimen | Timepoint | Cell type | avg_log2FC | p_val_adj |
GSE186960 | Panc1 cell line | Cell line | Pancreatic cancer | Pancreatic ductal adenocarcinoma (PDAC) | Chemotherapy | gemcitabine | NA | Malignant cells | -0.375561 | 5.89e-32 |
GSE138267 | CDX | Tumor tissue | Lung cancer | Small cell lung cancer (SCLC) | Chemotherapy | NA | NA | Malignant cells | 0.292096 | 0.00e+00 |
GSE169246_PacBlood | patients | Peripheral blood mononuclear cells | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Chemotherapy | paclitaxel | post | cDCs | -0.481937 | 5.38e-10 |
GSE169246_PacBlood | patients | Peripheral blood mononuclear cells | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Chemotherapy | paclitaxel | post | Plasma cells | -0.407026 | 1.21e-07 |
GSE169246_PacBlood | patients | Peripheral blood mononuclear cells | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Chemotherapy | paclitaxel | pre | Mono/Macro | -0.253678 | 0.00e+00 |
GSE169246_PacBlood | patients | Peripheral blood mononuclear cells | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Chemotherapy | paclitaxel | pre | cDCs | -0.342778 | 1.04e-06 |
GSE169246_PacBlood | patients | Peripheral blood mononuclear cells | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Chemotherapy | paclitaxel | pre | Plasma cells | -0.326929 | 4.52e-03 |
GSE169246_PacAteTissue | patients | Tumor tissue | Breast cancer | Advanced triple-negative breast cancer (TNBC) | Immunotherapy | atezolizumab + paclitaxel | post | Mono/Macro | 0.322432 | 2.95e-04 |
GSE164551 | patients | Bone marrow aspirate | Multiple myeloma | Refractory multiple myeloma (MM) | Immunotherapy | CAR-T | NA | CD4+ T cells | -0.260715 | 1.94e-09 |
GSE161801_PI | patients | Bone marrow aspirate | Multiple myeloma | Refractory multiple myeloma (MM) | Targeted therapy | carfilzomib + dexamethasone | post | Malignant cells | -0.478904 | 2.34e-22 |
GSE199333 | patients | Bone marrow aspirate | Acute myeloid leukemia | Primary FLT3-ITD-mutated acute myeloid leukemia (AML) | Targeted therapy | gilteritinib | post | NK cells | 0.323121 | 1.13e-33 |
GSE199333 | patients | Bone marrow aspirate | Acute myeloid leukemia | Primary FLT3-ITD-mutated acute myeloid leukemia (AML) | Targeted therapy | gilteritinib | post | CD4+ T cells | 0.365655 | 0.00e+00 |
GSE199333 | patients | Bone marrow aspirate | Acute myeloid leukemia | Primary FLT3-ITD-mutated acute myeloid leukemia (AML) | Targeted therapy | gilteritinib | pre | CD8+ T cells | -0.281742 | 1.40e-04 |
GSE164897_VemCob | A375 cell line | Cell line | Melanoma | BRAFV600E-mutant melanoma | Targeted therapy | vemurafenib + combimetinib | NA | Malignant cells | -1.26757 | 0.00e+00 |
GSE164897_VemTra | A375 cell line | Cell line | Melanoma | B+E2:E57RAFV600E-mutant melanoma | Targeted therapy | vemurafenib + trametinib | NA | Malignant cells | -1.07852 | 0.00e+00 |
Gene symbol | motif | TF_highConf |
NDUFA11 | homer__NAACAGCTGG_Tcf21 | TCF21 (directAnnotation). |
NDUFA11 | transfac_pro__M05798 | ZNF517 (directAnnotation). |
NDUFA11 | transfac_pro__M06924 | ZNF236 (directAnnotation). |
NDUFA11 | metacluster_33.8 | BRCA1; CHD2; CHD2; ETS1; NR3C1; ZBED1; ZBED1; ZBED1; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33; ZBTB33 (directAnnotation). CHD2; ZBTB33 (inferredBy_Orthology). |
NDUFA11 | metacluster_132.4 | MEF2B; MEF2B; MEF2B; MEF2B; MEF2C; MEF2C; MEF2D; MEF2D; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF; SRF (directAnnotation). SRF; SRF; SRF; SRF (inferredBy_Orthology). |
NDUFA11 | homer__ACAGGATGTGGT_ETS_RUNX | RUNX1 (directAnnotation). |
NDUFA11 | taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2 | ELK1; GCM1 (directAnnotation). |
NDUFA11 | metacluster_142.4 | POU2AF1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F1; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F3; POU2F3; POU2F3; POU2F3; POU2F3; POU3F1; POU3F2; POU3F3; POU4F1; POU5F1; POU5F1; POU5F1; POU5F1B; POU5F1B; POU5F1B; TBP (directAnnotation). CCDC160; CCDC160; CCDC160; CCDC160; CCDC160; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU2F2; POU3F1; POU3F1; POU3F1; POU3F1; POU3F1; POU3F3; POU3F3; POU3F3; POU3F3; POU3F3; POU3F3; POU3F4; POU5F1; POU5F1; POU5F1; POU5F1; POU5F1; POU5F1; POU5F1; POU5F1B; POU5F1B; POU5F1B; POU5F1B; POU5F1B; POU5F1B; POU5F1B; POU5F1B; POU5F2; POU5F2; POU5F2; POU5F2; POU5F2 (inferredBy_Orthology). |
NDUFA11 | transfac_pro__M05982 | ZFP14 (directAnnotation). |
NDUFA11 | hocomoco__DPRX_HUMAN.H11MO.0.D | DPRX (directAnnotation). |
NDUFA11 | transfac_pro__M06512 | ZNF461 (directAnnotation). |
NDUFA11 | metacluster_87.5 | ZNF296 (directAnnotation). |
NDUFA11 | metacluster_168.16 | FOXG1 (inferredBy_Orthology). |
NDUFA11 | taipale_tf_pairs__ETV2_SOX15_RSCGGAANNNNNNNYWTTGT_CAP_repr | ETV2; SOX15 (directAnnotation). |
NDUFA11 | taipale_tf_pairs__CUX1_SOX15_NATCRATNNNNNNNAACAATRS_CAP_repr | CUX1; SOX15 (directAnnotation). |
NDUFA11 | tfdimers__MD00602 | MYB; STAT6 (directAnnotation). |
NDUFA11 | transfac_pro__M05560 | AEBP2 (directAnnotation). |
NDUFA11 | tfdimers__MD00395 | NKX2-1; OTX1; OTX2 (directAnnotation). |
NDUFA11 | transfac_pro__M01108 | HOXA7 (directAnnotation). |
NDUFA11 | taipale_tf_pairs__ETV2_DRGX_RSCGGAWRYATTA_CAP_repr | DRGX; ETV2 (directAnnotation). |
1 | "Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618." |
2 | "Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335." |