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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NCK1

Summary for NCK1

Gene informationGene symbol

NCK1

Ensembl ID

ENSG00000158092

Entrez ID

4690

Gene nameNCK adaptor protein 1
SynonymsNCK|NCKalpha
Gene typeprotein_coding
UniProtAcc

P16333


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Dataset with differentially expressed gene: NCK1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3065511.40e-45

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Expression of NCK1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NCK1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NCK1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NCK1hsa-miR-590-3p99.0666NM_001190796
NCK1hsa-miR-477598.5272NM_001190796
NCK1hsa-miR-3120-3p97.7122NM_001190796
NCK1hsa-miR-5692a97.6975NM_001190796
NCK1hsa-miR-6875-3p97.5607NM_001190796
NCK1hsa-miR-137-3p95.5552NM_001190796
NCK1hsa-miR-4659b-3p94.7688NM_001190796
NCK1hsa-miR-4659a-3p94.7688NM_001190796
NCK1hsa-miR-426193.6839NM_001190796
NCK1hsa-miR-426793.1752NM_001190796
NCK1hsa-miR-450493.0269NM_001190796
NCK1hsa-miR-442992.5385NM_001190796
NCK1hsa-miR-320c92.5385NM_001190796
NCK1hsa-miR-320a-3p92.5385NM_001190796
NCK1hsa-miR-320b92.5385NM_001190796
NCK1hsa-miR-320d92.5385NM_001190796
NCK1hsa-miR-378j91.5743NM_001190796
NCK1hsa-miR-158790.2046NM_001190796
NCK1hsa-miR-3620-5p90.2046NM_001190796
NCK1hsa-miR-6839-5p89.4327NM_001190796
NCK1hsa-miR-4795-3p89.3859NM_001190796
NCK1hsa-miR-875-3p89.2271NM_001190796
NCK1hsa-miR-651-3p89.1726NM_001190796
NCK1hsa-miR-426489.1705NM_001190796
NCK1hsa-miR-1212288.8998NM_001190796
NCK1hsa-miR-449688.7995NM_001190796
NCK1hsa-miR-147b-5p88.4778NM_001190796
NCK1hsa-miR-670-3p87.9965NM_001190796
NCK1hsa-miR-153-5p87.7064NM_001190796
NCK1hsa-miR-58687.7005NM_001190796
NCK1hsa-miR-374a-5p86.5376NM_001190796
NCK1hsa-miR-576-5p85.9543NM_001190796
NCK1hsa-miR-374b-5p85.6713NM_001190796
NCK1hsa-miR-4680-3p85.6636NM_001190796
NCK1hsa-miR-465685.5782NM_001190796
NCK1hsa-miR-427585.1926NM_001190796
NCK1hsa-miR-1212084.8836NM_001190796
NCK1hsa-miR-664b-3p84.6925NM_001190796
NCK1hsa-miR-579-3p84.6925NM_001190796
NCK1hsa-miR-95-5p84.258NM_001190796
NCK1hsa-miR-3065-5p83.3065NM_001190796
NCK1hsa-miR-369-3p83.2572NM_001190796
NCK1hsa-miR-3135b83.1622NM_001190796
NCK1hsa-miR-6502-5p82.1999NM_001190796
NCK1hsa-miR-1301-5p82.1999NM_001190796
NCK1hsa-miR-7113-3p81.945NM_001190796
NCK1hsa-miR-568981.6235NM_001190796
NCK1hsa-miR-58781.1667NM_001190796
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Motifs and transcription factors (TFs) regulating NCK1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NCK1metacluster_7.13ZFX (directAnnotation).
NCK1cisbp__M01863ZNF711 (inferredBy_Orthology).
NCK1metacluster_151.2ZNF23 (directAnnotation).
NCK1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
NCK1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
NCK1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
NCK1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
NCK1transfac_pro__M06071ZNF814 (directAnnotation).
NCK1transfac_pro__M05628ZNF735 (directAnnotation).
NCK1hocomoco__KLF13_HUMAN.H11MO.0.DKLF13 (directAnnotation).
NCK1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
NCK1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
NCK1jaspar__MA0079.5SP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."