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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NCAM1

Summary for NCAM1

Gene informationGene symbol

NCAM1

Ensembl ID

ENSG00000149294

Entrez ID

4684

Gene nameneural cell adhesion molecule 1
SynonymsCD56|NCAM
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: NCAM1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preNK cells0.274021.77e-29

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells-0.263150.00e+00

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Expression of NCAM1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NCAM1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)
Gene symbolCell type with DEGInteraction IDInteracting pairGene AGene BIntegrinInteracting cell type1Interacting cell type2DatasetTimepointCondition
NCAM1Malignant cellsCPI-SS05632AB58NCAM1_FGFR1NCAM1FGFR1FalseMalignant cellsMalignant cells

GSE189460

preresistant
NCAM1Malignant cellsCPI-SS05632AB58NCAM1_FGFR1NCAM1FGFR1FalseNK cellsMalignant cells

GSE189460

preresistant
NCAM1Malignant cellsCPI-SS05632AB58NCAM1_FGFR1NCAM1FGFR1FalseMalignant cellsFibroblasts

GSE189460

preresistant
NCAM1Malignant cellsCPI-SS05632AB58NCAM1_FGFR1NCAM1FGFR1FalseMalignant cellsFibroblasts

GSE189460

presensitive
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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NCAM1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NCAM1hsa-miR-6867-5p99.9985NM_000615
NCAM1hsa-miR-30c-5p98.5345NM_000615
NCAM1hsa-miR-30e-5p98.5345NM_000615
NCAM1hsa-miR-30b-5p98.5345NM_000615
NCAM1hsa-miR-30d-5p98.5345NM_000615
NCAM1hsa-miR-30a-5p98.5345NM_000615
NCAM1hsa-miR-59598.2536NM_000615
NCAM1hsa-miR-509-5p93.828NM_000615
NCAM1hsa-miR-509-3-5p93.828NM_000615
NCAM1hsa-miR-1298-5p93.7828NM_000615
NCAM1hsa-miR-480393.7185NM_000615
NCAM1hsa-miR-128493.516NM_000615
NCAM1hsa-miR-548an93.2858NM_000615
NCAM1hsa-miR-6889-3p93.2378NM_000615
NCAM1hsa-miR-5589-5p92.7851NM_000615
NCAM1hsa-miR-426192.1043NM_000615
NCAM1hsa-miR-441892.0185NM_000615
NCAM1hsa-miR-3140-5p91.3087NM_000615
NCAM1hsa-miR-117991.037NM_001242608
NCAM1hsa-miR-6529-3p90.897NM_000615
NCAM1hsa-miR-4715-5p90.7609NM_000615
NCAM1hsa-miR-548l90.4612NM_000615
NCAM1hsa-miR-3117-5p90.3515NM_000615
NCAM1hsa-miR-4724-5p90.2306NM_000615
NCAM1hsa-miR-6757-3p90.1605NM_000615
NCAM1hsa-miR-4667-3p89.1204NM_000615
NCAM1hsa-miR-6737-3p88.7955NM_000615
NCAM1hsa-miR-147b-5p88.5443NM_000615
NCAM1hsa-miR-1212888.1627NM_000615
NCAM1hsa-miR-548t-5p88.0405NM_000615
NCAM1hsa-miR-548az-5p88.0405NM_000615
NCAM1hsa-miR-27a-3p87.8099NM_000615
NCAM1hsa-miR-27b-3p87.8099NM_000615
NCAM1hsa-miR-998587.8099NM_000615
NCAM1hsa-miR-7157-3p87.2644NM_000615
NCAM1hsa-miR-797586.8177NM_000615
NCAM1hsa-miR-1914-5p85.8769NM_000615
NCAM1hsa-miR-4742-3p85.6031NM_000615
NCAM1hsa-miR-4999-5p85.2276NM_001242608
NCAM1hsa-miR-216b-3p85.223NM_000615
NCAM1hsa-miR-6882-3p85.1042NM_000615
NCAM1hsa-miR-597-5p85.0591NM_000615
NCAM1hsa-miR-10527-5p84.6601NM_001242608
NCAM1hsa-miR-4731-5p84.5005NM_000615
NCAM1hsa-miR-806984.4228NM_001242608
NCAM1hsa-miR-651-3p84.2202NM_000615
NCAM1hsa-miR-446984.1756NM_000615
NCAM1hsa-miR-429284.089NM_001242608
NCAM1hsa-miR-6791-5p84.089NM_001242608
NCAM1hsa-miR-5580-3p84.0125NM_000615
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Motifs and transcription factors (TFs) regulating NCAM1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NCAM1transfac_pro__M06462ZNF441 (directAnnotation).
NCAM1transfac_pro__M06441ZSCAN30 (directAnnotation).
NCAM1taipale_tf_pairs__ELK1_SPDEF_NSMGGACGGAYNTCCKSN_CAPELK1; SPDEF (directAnnotation).
NCAM1transfac_pro__M06944PRDM15 (directAnnotation).
NCAM1taipale_tf_pairs__GCM1_FIGLA_CAGCTGNNNNNNNNTGCGGG_CAPFIGLA; GCM1 (directAnnotation).
NCAM1taipale_cyt_meth__HSF5_NRCGTTCTAGAAYGYN_eDBD_reprHSF5 (directAnnotation).
NCAM1transfac_pro__M06226ZNF460 (directAnnotation).
NCAM1taipale_cyt_meth__ZNF460_NAACGCCCCCCGN_eDBD_reprZNF460 (directAnnotation).
NCAM1transfac_pro__M01969FOXO1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."