DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: NBN

Summary for NBN

Gene informationGene symbol

NBN

Ensembl ID

ENSG00000104320

Entrez ID

4683

Gene namenibrin
SynonymsAT-V1|AT-V2|ATV|NBS|NBS1
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: NBN

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3299767.39e-23

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.4210915.42e-05

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.4873258.37e-03

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.5131110.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.299360.00e+00

Top

Expression of NBN in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to NBN

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating NBN

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NBNhsa-miR-561-3p98.337NM_001024688
NBNhsa-miR-471993.0362NM_001024688
NBNhsa-miR-806592.6476NM_001024688
NBNhsa-miR-607492.1116NM_001024688
NBNhsa-miR-625-5p90.5692NM_001024688
NBNhsa-miR-430689.9042NM_001024688
NBNhsa-miR-6815-3p88.879NM_001024688
NBNhsa-miR-337-3p87.7929NM_001024688
NBNhsa-miR-6758-3p87.6514NM_001024688
NBNhsa-miR-6809-5p87.5062NM_001024688
NBNhsa-miR-142-5p87.0902NM_001024688
NBNhsa-miR-5590-3p87.0902NM_001024688
NBNhsa-miR-6862-5p86.8181NM_001024688
NBNhsa-miR-64186.666NM_001024688
NBNhsa-miR-3617-5p86.666NM_001024688
NBNhsa-miR-612486.1902NM_001024688
NBNhsa-miR-185-5p85.9481NM_001024688
NBNhsa-miR-464485.9481NM_001024688
NBNhsa-miR-127584.3131NM_001024688
NBNhsa-miR-211383.5201NM_001024688
NBNhsa-miR-570483.2927NM_001024688
NBNhsa-miR-138-1-3p83.0335NM_001024688
NBNhsa-miR-317082.4846NM_001024688
NBNhsa-miR-430882.3371NM_001024688
NBNhsa-miR-4685-3p82.2283NM_001024688
NBNhsa-miR-428782.2283NM_001024688
NBNhsa-miR-3927-3p82.18NM_001024688
NBNhsa-miR-6831-5p82.18NM_001024688
NBNhsa-miR-4650-3p82.0772NM_001024688
NBNhsa-miR-548aa82.0011NM_001024688
NBNhsa-miR-548t-3p82.0011NM_001024688
NBNhsa-miR-548ap-3p82.0011NM_001024688
NBNhsa-miR-7159-3p80.9026NM_001024688
NBNhsa-miR-6855-5p80.8614NM_001024688
Page: 1

Top

Motifs and transcription factors (TFs) regulating NBN

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NBNtaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
NBNkznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
NBNtaipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
NBNswissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
NBNmetacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
NBNdbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
NBNtransfac_pro__M04950EGR1 (directAnnotation).
NBNmetacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
NBNtaipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
NBNmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
NBNtaipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
NBNtransfac_pro__M00652NRF1 (directAnnotation).
NBNtransfac_pro__M04866HDAC2 (directAnnotation).
NBNtaipale_tf_pairs__TFAP2C_MAX_TNSCCNNNGGSNNNCACGTGN_CAP_reprMAX; TFAP2C (directAnnotation).
NBNswissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
NBNtaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
NBNjaspar__MA1684.1FOXN1 (inferredBy_Orthology).
NBNtransfac_pro__M06741ZNF70 (directAnnotation).
NBNtransfac_pro__M06556ZNF383 (directAnnotation).
NBNtaipale_tf_pairs__GCM1_FOXI1_NNGTMAATANGGGYR_CAPFOXI1; GCM1 (directAnnotation).
NBNtransfac_pro__M05991ZFP64 (directAnnotation).
NBNkznf__ZNF77_Imbeault2017_OM_MEMEZNF77 (directAnnotation).
NBNtransfac_pro__M06012ZNF586 (directAnnotation).
NBNtransfac_pro__M01239RELA (directAnnotation).
NBNtfdimers__MD00143IKZF1; MZF1 (directAnnotation).
NBNtaipale_tf_pairs__ETV2_GSC2_RCCGGANNNNNNNNNTAATCCN_CAP_reprETV2; GSC2 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."