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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: NBEA

Summary for NBEA

Gene informationGene symbol

NBEA

Ensembl ID

ENSG00000172915

Entrez ID

26960

Gene nameneurobeachin
SynonymsBCL8B|FLJ10197|KIAA1544|LYST2
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: NBEA

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-0.4138970.00e+00

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Expression of NBEA in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to NBEA

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating NBEA

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NBEAhsa-miR-95-5p99.8897NM_015678
NBEAhsa-miR-98-3p99.38NM_015678
NBEAhsa-miR-520d-5p99.3238NM_015678
NBEAhsa-let-7f-1-3p99.2707NM_015678
NBEAhsa-let-7b-3p99.2707NM_015678
NBEAhsa-let-7a-3p99.2707NM_015678
NBEAhsa-miR-381-3p99.2665NM_015678
NBEAhsa-miR-30099.2665NM_015678
NBEAhsa-miR-524-5p99.2577NM_015678
NBEAhsa-miR-684498.9319NM_015678
NBEAhsa-miR-6787-3p97.7535NM_015678
NBEAhsa-miR-624-3p97.598NM_015678
NBEAhsa-miR-445596.9862NM_015678
NBEAhsa-miR-608396.7504NM_015678
NBEAhsa-miR-4695-3p96.7085NM_015678
NBEAhsa-miR-5692a96.6771NM_015678
NBEAhsa-miR-848596.5194NM_015678
NBEAhsa-miR-397396.4219NM_015678
NBEAhsa-miR-211-5p95.0784NM_015678
NBEAhsa-miR-204-5p95.0784NM_015678
NBEAhsa-miR-4760-3p93.9224NM_015678
NBEAhsa-miR-196a-1-3p93.8699NM_015678
NBEAhsa-miR-5588-5p93.8043NM_015678
NBEAhsa-miR-4799-3p93.8043NM_015678
NBEAhsa-miR-4720-5p93.8043NM_015678
NBEAhsa-miR-6776-5p93.6598NM_015678
NBEAhsa-miR-548l93.4907NM_015678
NBEAhsa-miR-6740-3p93.325NM_015678
NBEAhsa-miR-1212092.7268NM_015678
NBEAhsa-miR-806092.637NM_015678
NBEAhsa-miR-44892.5215NM_015678
NBEAhsa-miR-513b-3p92.1273NM_015678
NBEAhsa-miR-514b-5p92.0669NM_015678
NBEAhsa-miR-513c-5p92.0669NM_015678
NBEAhsa-miR-3184-3p91.6896NM_015678
NBEAhsa-miR-137-3p91.4284NM_015678
NBEAhsa-miR-548q90.7235NM_015678
NBEAhsa-miR-5589-5p90.6738NM_015678
NBEAhsa-miR-106a-5p90.6704NM_015678
NBEAhsa-miR-20a-5p90.6704NM_015678
NBEAhsa-miR-526b-3p90.6704NM_015678
NBEAhsa-miR-106b-5p90.6704NM_015678
NBEAhsa-miR-797890.5672NM_015678
NBEAhsa-miR-6749-3p90.3772NM_015678
NBEAhsa-miR-318590.2518NM_015678
NBEAhsa-miR-4764-3p90.2292NM_015678
NBEAhsa-miR-188-5p90.1647NM_015678
NBEAhsa-miR-6866-3p90.1647NM_015678
NBEAhsa-miR-4760-5p90.0761NM_015678
NBEAhsa-miR-806189.6804NM_015678
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Motifs and transcription factors (TFs) regulating NBEA

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NBEAtransfac_pro__M06074ZNF732 (directAnnotation).
NBEAhocomoco__OTX1_HUMAN.H11MO.0.DOTX1 (directAnnotation).
NBEAtransfac_pro__M02843BBX (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."