DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target< (This gene does not contain this module)

Gene: NAB1

Summary for NAB1

Gene informationGene symbol

NAB1

Ensembl ID

ENSG00000138386

Entrez ID

4664

Gene nameNGFI-A binding protein 1
SynonymsNA
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: NAB1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

PMID34715028

patientsTumor tissueKidney cancerClear cell renal cell carcinoma (ccRCC)ImmunotherapynivolumabpostCD8+ T cells-0.5077730.00e+00

Top

Expression of NAB1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to NAB1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating NAB1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
NAB1hsa-miR-129799.4638NM_001321312
NAB1hsa-miR-366299.3684NM_001321312
NAB1hsa-miR-128399.1591NM_001321312
NAB1hsa-miR-26b-5p99.1277NM_001321312
NAB1hsa-miR-26a-5p99.1277NM_001321312
NAB1hsa-miR-446599.0906NM_001321312
NAB1hsa-miR-548aj-3p98.3234NM_001321312
NAB1hsa-miR-548x-3p98.3234NM_001321312
NAB1hsa-miR-548aq-3p97.8211NM_001321312
NAB1hsa-miR-548ah-3p97.8211NM_001321312
NAB1hsa-miR-548ae-3p97.8211NM_001321312
NAB1hsa-miR-548j-3p97.8211NM_001321312
NAB1hsa-miR-548am-3p97.8211NM_001321312
NAB1hsa-miR-374c-5p97.5253NM_001321312
NAB1hsa-miR-655-3p97.5253NM_001321312
NAB1hsa-miR-7159-3p96.3596NM_001321312
NAB1hsa-miR-364696.1263NM_001321312
NAB1hsa-miR-16-2-3p96.097NM_001321312
NAB1hsa-miR-195-3p96.097NM_001321312
NAB1hsa-miR-3682-5p95.9738NM_001321312
NAB1hsa-miR-302a-5p95.5036NM_001321312
NAB1hsa-miR-367195.3489NM_001321312
NAB1hsa-miR-449695.2251NM_001321312
NAB1hsa-miR-469895.1916NM_001321312
NAB1hsa-miR-427695.0763NM_001321312
NAB1hsa-miR-498-5p93.8021NM_001321312
NAB1hsa-miR-4474-3p93.0464NM_001321312
NAB1hsa-miR-525-5p92.9725NM_001321312
NAB1hsa-miR-520a-5p92.9725NM_001321312
NAB1hsa-miR-942-5p92.7241NM_001321312
NAB1hsa-miR-4782-5p92.3374NM_001321312
NAB1hsa-miR-570692.3374NM_001321312
NAB1hsa-miR-1213291.9444NM_001321312
NAB1hsa-miR-338-5p91.7881NM_001321312
NAB1hsa-miR-6807-3p91.5462NM_001321312
NAB1hsa-miR-4662a-3p91.2062NM_001321312
NAB1hsa-miR-217-5p91.1942NM_001321312
NAB1hsa-miR-3180-5p90.6881NM_001321312
NAB1hsa-miR-58790.2004NM_001321312
NAB1hsa-miR-6768-5p89.1622NM_001321312
NAB1hsa-miR-808288.3809NM_001321312
NAB1hsa-miR-100-3p88.3669NM_001321312
NAB1hsa-miR-6889-5p88.3307NM_001321312
NAB1hsa-miR-3160-3p88.2562NM_001321312
NAB1hsa-miR-848588.2529NM_001321312
NAB1hsa-miR-432888.1606NM_001321312
NAB1hsa-miR-494-3p87.9953NM_001321312
NAB1hsa-miR-6885-3p87.2071NM_001321312
NAB1hsa-miR-569787.1503NM_001321312
NAB1hsa-miR-63086.8314NM_001321312
Page: 1 2

Top

Motifs and transcription factors (TFs) regulating NAB1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
NAB1jaspar__MA0604.1ATF1 (inferredBy_Orthology).
NAB1taipale_cyt_meth__CREB1_NRTGACGTN_eDBD_reprCREB1 (directAnnotation).
NAB1cisbp__M04023CREB1 (directAnnotation).
NAB1dbtfbs__GMEB2_HepG2_ENCSR745VSQ_merged_N1GMEB2 (directAnnotation).
NAB1metacluster_111.3ATF1; ATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREM; CREM; CREM; CREM; E4F1; E4F1 (directAnnotation). CREB1; CREB1; CREM; JDP2 (inferredBy_Orthology).
NAB1transfac_pro__M01088DEAF1 (inferredBy_Orthology).
NAB1hocomoco__GMEB2_HUMAN.H11MO.0.DGMEB2 (directAnnotation).
NAB1metacluster_111.5E4F1; E4F1 (directAnnotation).
NAB1hdpi__NRLNRL (directAnnotation).
NAB1transfac_pro__M08803CREM (directAnnotation).
NAB1transfac_pro__M01090SMAD9 (inferredBy_Orthology).
NAB1taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
NAB1hdpi__RARARARA (directAnnotation).
NAB1jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
NAB1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
NAB1transfac_pro__M04893TAF1 (directAnnotation).
NAB1swissregulon__hs__GMEB2GMEB2 (directAnnotation).
NAB1hdpi__FEZF2FEZF2 (directAnnotation).
NAB1hocomoco__FEV_HUMAN.H11MO.0.BFEV (directAnnotation).
NAB1hdpi__HIP2UBE2K (directAnnotation).
NAB1flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
NAB1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
NAB1cisbp__M00775ZBTB1 (inferredBy_Orthology).
NAB1hdpi__PDLIM5PDLIM5 (directAnnotation).
NAB1transfac_pro__M03846SMAD5 (directAnnotation).
NAB1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
NAB1hdpi__HTATIP2HTATIP2 (directAnnotation).
NAB1transfac_pro__M00938E2F1 (directAnnotation).
NAB1transfac_pro__M04817ZBTB33 (directAnnotation).
NAB1transfac_pro__M01199TRIM28 (directAnnotation).
NAB1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
NAB1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
NAB1transfac_pro__M01240GTF2IRD1 (directAnnotation).
NAB1transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
NAB1hdpi__OTUD4OTUD4 (directAnnotation).
NAB1transfac_pro__M02844BCL6B (inferredBy_Orthology).
NAB1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
NAB1transfac_pro__M07436WT1 (directAnnotation).
NAB1homer__NANTGCSGCA_Zfp57ZFP57 (directAnnotation).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."