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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target

Gene: MYC

Summary for MYC

Gene informationGene symbol

MYC

Ensembl ID

ENSG00000136997

Entrez ID

4609

Gene nameMYC proto-oncogene, bHLH transcription factor
SynonymsbHLHe39|c-Myc|MYCC
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: MYC

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.2845541.83e-17

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postProgenitors-0.4604313.12e-02

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD4+ T cells0.3976380.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.2747962.06e-09

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells-0.608910.00e+00

GSE161801_PI

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapycarfilzomib + dexamethasonepostMalignant cells0.7027994.02e-08

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.394716.28e-43

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.6836020.00e+00

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells0.5760861.52e-40

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells0.9269690.00e+00

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells0.8651030.00e+00

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells0.6956440.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells0.7022420.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreB cells-0.2590075.43e-07

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.4366061.21e-04

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Expression of MYC in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MYC

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

MYC

Regulation by the Disease Microenvironment

MYC

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating MYC

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MYChsa-miR-548aj-3p98.7084NM_002467
MYChsa-miR-548x-3p98.7084NM_002467
MYChsa-miR-548ae-3p98.5838NM_002467
MYChsa-miR-548z98.5838NM_002467
MYChsa-miR-548aq-3p98.5838NM_002467
MYChsa-miR-548am-3p98.5838NM_002467
MYChsa-miR-548ac98.5838NM_002467
MYChsa-miR-548h-3p98.5838NM_002467
MYChsa-miR-548d-3p98.5838NM_002467
MYChsa-miR-548bb-3p98.5838NM_002467
MYChsa-miR-548j-3p98.5838NM_002467
MYChsa-miR-548ah-3p98.5838NM_002467
MYChsa-miR-1304-5p95.7384NM_002467
MYChsa-miR-4699-3p93.2632NM_002467
MYChsa-miR-182792.1274NM_002467
MYChsa-miR-5197-5p92.0821NM_002467
MYChsa-miR-4652-3p91.7419NM_002467
MYChsa-miR-34b-5p91.3811NM_002467
MYChsa-miR-2682-5p90.0555NM_002467
MYChsa-miR-449c-5p90.0555NM_002467
MYChsa-miR-548au-3p87.9759NM_002467
MYChsa-miR-129487.6137NM_002467
MYChsa-miR-998687.6137NM_002467
MYChsa-miR-548at-5p84.9401NM_002467
MYChsa-miR-428282.7277NM_002467
MYChsa-miR-5692a80.3928NM_002467
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Motifs and transcription factors (TFs) regulating MYC

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
MYCmetacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
MYCtransfac_pro__M04748GABPA (directAnnotation).
MYCtransfac_public__M00024E2F1 (directAnnotation).
MYCswissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
MYCjaspar__MA0776.1MYBL1 (directAnnotation).
MYCtransfac_pro__M01182HINFP (directAnnotation).
MYChdpi__FLI1FLI1 (directAnnotation).
MYCtaipale_tf_pairs__HOXB2_ETV4_ACCGGAAATGAN_CAPETV4; HOXB2 (directAnnotation).
MYCtransfac_pro__M05349SNAI3 (directAnnotation).
MYCtransfac_pro__M05930ZNF286A (directAnnotation).
MYCtransfac_pro__M06196ZNF81 (directAnnotation).
MYCmetacluster_52.13LEF1; LEF1; LEF1; LEF1; TCF7; TCF7; TCF7L1; TCF7L1 (directAnnotation).
MYCkznf__ZNF443_Imbeault2017_RP_RCADEZNF443 (directAnnotation).
MYCmetacluster_113.3MYBL1; MYBL1; MYBL2; MYBL2; OVOL1; OVOL2 (directAnnotation). MYB; MYBL1; MYBL1; MYBL1; MYBL1; MYBL2; OVOL1 (inferredBy_Orthology).
MYCmetacluster_111.4ATF1; ATF1; ATF1; ATF1; ATF1; ATF1; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF2; ATF3; ATF3; ATF3; ATF3; ATF3; ATF4; ATF4; ATF5; ATF6; ATF6B; ATF7; ATF7; ATF7; BATF3; BATF3; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB1; CREB3; CREB3L4; CREB3L4; CREB5; CREB5; CREB5; CREM; CREM; CREM; CREM; CREM; FOSB; FOSL1; FOSL1; FOSL2; JDP2; JDP2; JDP2; JUN; JUNB; JUNB; JUNB; JUND; JUND; JUND; JUND; JUND; XBP1; XBP1; XBP1; ZNF629 (directAnnotation). ATF1; ATF1; ATF1; ATF2; ATF2; ATF3; ATF6; ATF6B; ATF7; ATF7; ATF7; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; ATF7-NPFF; BATF; BATF2; BATF3; CREB1; CREB1; CREB3; CREB3L1; CREB3L2; CREB3L3; CREB3L4; CREM; FOS; FOSB; FOSL1; FOSL2; JDP2; JDP2 (inferredBy_Orthology).
MYCmetacluster_131.3ZNF436 (inferredBy_Orthology).
MYCmetacluster_196.7POLR3A (directAnnotation).
MYCtransfac_pro__M06259ZNF91 (directAnnotation).
MYCmetacluster_135.11NR2C2 (directAnnotation).
MYCmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
MYCtaipale__MYBL2_DBD_AACCGTTAACGGNNMYBL2 (directAnnotation).
MYCtransfac_pro__M05888ZNF467 (inferredBy_Orthology).
MYCtfdimers__MD00136E2F6; GATA3 (directAnnotation).
MYCmetacluster_168.4ZNF652 (directAnnotation).
MYCmetacluster_141.4GLIS2 (directAnnotation).
MYCtaipale_tf_pairs__ERF_HOXA3_RSCGGAWNNNNNNNYMATTA_CAP_reprERF; HOXA3 (directAnnotation).
MYCtransfac_pro__M05721ZNF235 (directAnnotation).
MYCmetacluster_140.3NKX2-3; NKX2-5; NKX2-8 (directAnnotation).
MYCtfdimers__MD00516SOX10 (directAnnotation).
MYChocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
MYCtransfac_pro__M05851ZNF768 (inferredBy_Orthology).
MYCtransfac_pro__M06019ZNF98 (directAnnotation).
MYCtransfac_pro__M06959ZNF425 (directAnnotation).
MYCtaipale_tf_pairs__ELK1_PAX9_RSCGGAACYACGCWYSANTG_CAPELK1; PAX9 (directAnnotation).
MYCtransfac_pro__M04855IRF4 (directAnnotation).
MYCtaipale_tf_pairs__PITX1_EOMES_RGGTGTKANNNNGGATTA_CAP_reprEOMES; PITX1 (directAnnotation).
MYChdpi__PRKRIRTHAP12 (directAnnotation).
MYCtransfac_pro__M06493ZNF668 (inferredBy_Orthology).
MYCmetacluster_140.8ZNF564 (directAnnotation).
MYCmetacluster_178.16ZNF660; ZNF660 (directAnnotation).
MYCtfdimers__MD00490CDX2; SOX2 (directAnnotation).
MYCtransfac_pro__M06953VAX1 (inferredBy_Orthology).
MYCtransfac_pro__M05354ZNF800 (inferredBy_Orthology).
MYCtfdimers__MD00440FOXI1; IRF1 (directAnnotation).
MYCtfdimers__MD00256HOXA13 (directAnnotation).
MYCtransfac_pro__M06504ZFP62 (directAnnotation).
MYCtransfac_pro__M06806PEG3 (directAnnotation).
MYCtransfac_public__M00041ATF2; JUN (directAnnotation).
MYCjaspar__MA1657.1ZNF652 (directAnnotation).
MYCmetacluster_168.14ZNF33A; ZNF33B; ZNF394; ZNF768 (directAnnotation). ZNF768 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
MYCmetacluster_156.2upMalignant cells

GSE161801_IMiD

post
MYCtransfac_public__M00123downB cells

GSE161801_IMiD

pre
MYChomer__NCCACGTG_c-MycdownProgenitors

GSE197268_Axi-cel

post
MYChomer__NCCACGTG_c-MycupMalignant cells

GSE199333

post
MYCtransfac_pro__M00322downMalignant cells

GSE207422_Tor

post
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
MYC"Acetylsalicylic acid"

DB00945

small molecule
MYC"Dimethyl sulfoxide"

DB01093

small molecule
MYC"Doconexent"

DB03756

small molecule
MYC"Nadroparin"

DB08813

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."