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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: MRPS30

Summary for MRPS30

Gene informationGene symbol

MRPS30

Ensembl ID

ENSG00000112996

Entrez ID

10884

Gene namemitochondrial ribosomal protein S30
SynonymsPAP|PDCD9
Gene typeprotein_coding
UniProtAcc

Q9NP92


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Dataset with differentially expressed gene: MRPS30

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_JQ1

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1NAMalignant cells-0.510446.60e-40

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.4708841.19e-21

GSE131984_JQ1Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + palbociclibNAMalignant cells-0.4956868.22e-30

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2935073.76e-06

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells0.668030.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.4458510.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3659020.00e+00

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Expression of MRPS30 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MRPS30

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating MRPS30

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MRPS30hsa-miR-545-5p95.9944NM_016640
MRPS30hsa-miR-380-5p94.055NM_016640
MRPS30hsa-miR-56394.055NM_016640
MRPS30hsa-miR-544a87.6401NM_016640
MRPS30hsa-miR-20a-3p87.4294NM_016640
MRPS30hsa-miR-428284.2917NM_016640
MRPS30hsa-miR-4766-3p84.2347NM_016640
MRPS30hsa-miR-446883.2055NM_016640
MRPS30hsa-miR-4703-5p82.3506NM_016640
MRPS30hsa-miR-616-5p80.2761NM_016640
MRPS30hsa-miR-373-5p80.2761NM_016640
MRPS30hsa-miR-371b-5p80.2761NM_016640
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Motifs and transcription factors (TFs) regulating MRPS30

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
MRPS30taipale_tf_pairs__ELK1_TEF_NSCGGAWNTTACGTAAN_CAPELK1; TEF (directAnnotation).
MRPS30transfac_pro__M06156ZNF75D (directAnnotation).
MRPS30taipale_tf_pairs__ERF_FOXI1_RSCGGATGTTKWN_CAP_reprERF; FOXI1 (directAnnotation).
MRPS30hdpi__TP73TP73 (directAnnotation).
MRPS30taipale_tf_pairs__ERF_HES7_NCCGGAANNNNNNCACGYGNN_CAP_reprERF; HES7 (directAnnotation).
MRPS30metacluster_19.7GMEB1; GMEB2 (inferredBy_Orthology).
MRPS30transfac_pro__M04826EP300 (directAnnotation).
MRPS30swissregulon__hs__ELK1ELK1 (directAnnotation).
MRPS30metacluster_183.4ETS1 (inferredBy_Orthology).
MRPS30taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
MRPS30taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
MRPS30taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
MRPS30taipale_tf_pairs__ETV2_FOXI1_RSCGGATGTTKW_CAPETV2; FOXI1 (directAnnotation).
MRPS30transfac_pro__M04862NRF1 (directAnnotation).
MRPS30taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
MRPS30transfac_pro__M00492STAT1 (directAnnotation).
MRPS30transfac_pro__M04848TAF1 (directAnnotation).
MRPS30metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
MRPS30metacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
MRPS30metacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
MRPS30taipale_tf_pairs__GCM1_ELF1_NRCCCRNNCGGAAGNN_CAP_reprELF1; GCM1 (directAnnotation).
MRPS30jaspar__MA0502.2NFYB (directAnnotation).
MRPS30taipale_tf_pairs__ELK1_FOXI1_RSCGGATGTKKN_CAPELK1; FOXI1 (directAnnotation).
MRPS30taipale_tf_pairs__GCM1_ETV4_RTGCGGGCGGAAGTR_CAPETV4; GCM1 (directAnnotation).
MRPS30taipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
MRPS30taipale_tf_pairs__GCM1_ELK1_RTGCGGGCGGAAGTN_CAP_2ELK1; GCM1 (directAnnotation).
MRPS30taipale_tf_pairs__ETV2_TEF_RSCGGAWNTTRCGYAAN_CAPETV2; TEF (directAnnotation).
MRPS30kznf__ZNF441_Imbeault2017_OM_RCADEZNF441 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."