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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: MMP13

Summary for MMP13

Gene informationGene symbol

MMP13

Ensembl ID

ENSG00000137745

Entrez ID

4322

Gene namematrix metallopeptidase 13
SynonymsCLG3
Gene typeprotein_coding
UniProtAcc

P45452


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Dataset with differentially expressed gene: MMP13

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-6.335971.18e-02

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Expression of MMP13 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MMP13

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating MMP13

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MMP13hsa-miR-5692a95.6819NM_002427
MMP13hsa-miR-431794.9536NM_002427
MMP13hsa-miR-607494.2931NM_002427
MMP13hsa-miR-501-5p92.777NM_002427
MMP13hsa-miR-3678-3p90.5006NM_002427
MMP13hsa-miR-6720-5p89.7926NM_002427
MMP13hsa-miR-6512-3p89.7926NM_002427
MMP13hsa-miR-1277-5p89.6835NM_002427
MMP13hsa-miR-365789.6452NM_002427
MMP13hsa-miR-126788.6804NM_002427
MMP13hsa-miR-130a-5p88.1008NM_002427
MMP13hsa-miR-891b86.4679NM_002427
MMP13hsa-miR-6882-5p85.1582NM_002427
MMP13hsa-miR-548ah-5p84.669NM_002427
MMP13hsa-miR-360984.669NM_002427
MMP13hsa-miR-152-3p84.6571NM_002427
MMP13hsa-miR-148b-3p84.6571NM_002427
MMP13hsa-miR-148a-3p84.6571NM_002427
MMP13hsa-miR-664a-3p82.5939NM_002427
Page: 1

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Motifs and transcription factors (TFs) regulating MMP13

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
MMP13"2-{4-[4-(4-Chloro-Phenoxy)-Benzenesulfonyl]-Tetrahydro-Pyran-4-Yl}-N-Hydroxy-Acetamide"

DB02049

small molecule
MMP13"3-Methylpyridine"

DB01996

small molecule
MMP13"4-methoxybenzenesulfinate"

DB03033

small molecule
MMP13"4-{[1-METHYL-2,4-DIOXO-6-(3-PHENYLPROP-1-YN-1-YL)-1,4-DIHYDROQUINAZOLIN-3(2H)-YL]METHYL}BENZOIC ACI

DB07827

small molecule
MMP13"5-(2-ETHOXYETHYL)-5-[4-(4-FLUOROPHENOXY)PHENOXY]PYRIMIDINE-2,4,6(1H,3H,5H)-TRIONE"

DB08388

small molecule
MMP13"BENZYL 6-BENZYL-5,7-DIOXO-6,7-DIHYDRO-5H-[1,3]THIAZOLO[3,2-C]PYRIMIDINE-2-CARBOXYLATE"

DB08561

small molecule
MMP13"CTS-1027"

DB08490

small molecule
MMP13"Endostatin"

DB06423

biotech
MMP13"Hydroxyaminovaline"

DB02697

small molecule
MMP13"Marimastat"

DB00786

small molecule
MMP13"PYRIMIDINE-4,6-DICARBOXYLIC ACID BIS-(3-METHYL-BENZYLAMIDE)"

DB04759

small molecule
MMP13"PYRIMIDINE-4,6-DICARBOXYLIC ACID BIS-(4-FLUORO-3-METHYL-BENZYLAMIDE)"

DB04760

small molecule
MMP13"PYRIMIDINE-4,6-DICARBOXYLIC ACID BIS-[(PYRIDIN-3-YLMETHYL)-AMIDE]"

DB04761

small molecule
MMP13"TERT-BUTYL 4-({[4-(BUT-2-YN-1-YLAMINO)PHENYL]SULFONYL}METHYL)-4-[(HYDROXYAMINO)CARBONYL]PIPERIDINE-

DB07013

small molecule
MMP13"WAY-151693"

DB02071

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."