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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: MED13

Summary for MED13

Gene informationGene symbol

MED13

Ensembl ID

ENSG00000108510

Entrez ID

9969

Gene namemediator complex subunit 13
SynonymsKIAA0593|THRAP1|TRAP240
Gene typeprotein_coding
UniProtAcc

Q9UHV7


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Dataset with differentially expressed gene: MED13

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3036434.04e-22

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-0.2923230.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5583188.15e-31

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Expression of MED13 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to MED13

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating MED13

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
MED13hsa-miR-5692a99.5963NM_005121
MED13hsa-miR-548x-3p99.3711NM_005121
MED13hsa-miR-548aj-3p99.3711NM_005121
MED13hsa-miR-5582-3p99.2268NM_005121
MED13hsa-miR-548aq-3p98.9789NM_005121
MED13hsa-miR-548ae-3p98.9789NM_005121
MED13hsa-miR-548am-3p98.9789NM_005121
MED13hsa-miR-548ah-3p98.9789NM_005121
MED13hsa-miR-548j-3p98.9789NM_005121
MED13hsa-miR-477597.9682NM_005121
MED13hsa-miR-365897.5035NM_005121
MED13hsa-miR-369-3p97.3074NM_005121
MED13hsa-miR-3689b-5p96.9487NM_005121
MED13hsa-miR-3689e96.9487NM_005121
MED13hsa-miR-3689a-5p96.9487NM_005121
MED13hsa-miR-3689f96.9487NM_005121
MED13hsa-miR-316396.8378NM_005121
MED13hsa-miR-7154-5p96.6602NM_005121
MED13hsa-miR-513a-3p96.3748NM_005121
MED13hsa-miR-513c-3p96.3748NM_005121
MED13hsa-miR-58396.2615NM_005121
MED13hsa-miR-3606-3p96.1622NM_005121
MED13hsa-miR-6811-5p96.1077NM_005121
MED13hsa-miR-6511b-5p96.1077NM_005121
MED13hsa-miR-3613-3p96.0288NM_005121
MED13hsa-miR-428295.8994NM_005121
MED13hsa-miR-471995.6533NM_005121
MED13hsa-miR-3619-3p95.5884NM_005121
MED13hsa-miR-1213695.5103NM_005121
MED13hsa-miR-653-5p95.5029NM_005121
MED13hsa-miR-450395.2463NM_005121
MED13hsa-miR-6507-3p94.7625NM_005121
MED13hsa-miR-608294.4363NM_005121
MED13hsa-miR-888-3p94.3425NM_005121
MED13hsa-miR-4776-5p94.1845NM_005121
MED13hsa-miR-590-3p93.806NM_005121
MED13hsa-miR-360993.7965NM_005121
MED13hsa-miR-548ah-5p93.7965NM_005121
MED13hsa-miR-42993.0432NM_005121
MED13hsa-miR-200c-3p93.0432NM_005121
MED13hsa-miR-200b-3p93.0432NM_005121
MED13hsa-miR-5195-3p92.8681NM_005121
MED13hsa-miR-145-5p92.8681NM_005121
MED13hsa-miR-4772-3p92.8678NM_005121
MED13hsa-miR-425192.61NM_005121
MED13hsa-miR-548ao-5p92.5853NM_005121
MED13hsa-miR-548ax92.5853NM_005121
MED13hsa-miR-208a-3p92.5203NM_005121
MED13hsa-miR-208b-3p92.5203NM_005121
MED13hsa-miR-548e-5p92.4672NM_005121
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Motifs and transcription factors (TFs) regulating MED13

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
MED13metacluster_135.11NR2C2 (directAnnotation).
MED13metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
MED13metacluster_144.3ZNF704; ZNF704 (directAnnotation).
MED13metacluster_7.13ZFX (directAnnotation).
MED13kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
MED13cisbp__M00968MTF2 (directAnnotation).
MED13metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
MED13metacluster_160.20JUND; PRDM15 (directAnnotation).
MED13cisbp__M00341PAX6 (directAnnotation).
MED13metacluster_198.3ZFP64 (directAnnotation).
MED13metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
MED13metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
MED13jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
MED13metacluster_61.1DEAF1; DEAF1 (directAnnotation).
MED13cisbp__M00788ZFY (inferredBy_Orthology).
MED13kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
MED13metacluster_175.1ZNF283 (directAnnotation).
MED13hdpi__ZNF304ZNF304 (directAnnotation).
MED13transfac_pro__M02844BCL6B (inferredBy_Orthology).
MED13metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
MED13transfac_pro__M01199TRIM28 (directAnnotation).
MED13kznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
MED13metacluster_151.2ZNF23 (directAnnotation).
MED13transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
MED13transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
MED13transfac_pro__M03806ZBTB7C (directAnnotation).
MED13transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
MED13jaspar__MA0502.2NFYB (directAnnotation).
MED13metacluster_144.8ZNF30; ZNF30 (directAnnotation).
MED13tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
MED13cisbp__M00249WT1 (directAnnotation).
MED13cisbp__M01863ZNF711 (inferredBy_Orthology).
MED13taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
MED13taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
MED13kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
MED13kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
MED13kznf__ZNF100_Imbeault2017_RP_RCADEZNF100 (directAnnotation).
MED13jaspar__MA1721.1ZNF93 (directAnnotation).
MED13metacluster_7.5PLAGL1; PLAGL1 (directAnnotation).
MED13kznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
MED13dbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
MED13taipale_tf_pairs__ETV5_HES7_CCGGAANNNNNNCACGTG_CAPETV5; HES7 (directAnnotation).
MED13flyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
MED13dbtfbs__ZNF407_representative_N1ZNF407 (directAnnotation).
MED13taipale_tf_pairs__TFAP2C_E2F8_NNTCCCGCNNNCCNNNGGC_CAP_reprE2F8; TFAP2C (directAnnotation).
MED13jaspar__MA0748.2YY2 (directAnnotation).
MED13kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
MED13swissregulon__hs__CHD1CHD1 (directAnnotation).
MED13idmmpmm__MadSMAD9 (inferredBy_Orthology).
MED13kznf__ZNF383_Imbeault2017_OM_RCADEZNF383 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."