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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LRPAP1

Summary for LRPAP1

Gene informationGene symbol

LRPAP1

Ensembl ID

ENSG00000163956

Entrez ID

4043

Gene nameLDL receptor related protein associated protein 1
SynonymsA2MRAP|HBP44|RAP
Gene typeprotein_coding
UniProtAcc

P30533


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Dataset with differentially expressed gene: LRPAP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.2819897.20e-15

GSE163836

FCIBC02 cell lineCell lineBreast cancerInflammatory breast cancerChemotherapypaclitaxelNAMalignant cells-0.3177380.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells1.033190.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostMalignant cells-1.073520.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMalignant cells-0.3053230.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.5646990.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-0.3905180.00e+00

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Expression of LRPAP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LRPAP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LRPAP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LRPAP1hsa-miR-873-3p96.8353NM_002337
LRPAP1hsa-miR-24-3p96.5947NM_002337
LRPAP1hsa-miR-429496.153NM_002337
LRPAP1hsa-miR-377-3p93.7705NM_002337
LRPAP1hsa-miR-430988.8308NM_002337
LRPAP1hsa-miR-467388.0519NM_002337
LRPAP1hsa-miR-3613-3p87.8222NM_002337
LRPAP1hsa-miR-203a-3p87.314NM_002337
LRPAP1hsa-miR-6799-5p85.555NM_002337
LRPAP1hsa-miR-20a-5p85.3681NM_002337
LRPAP1hsa-miR-106b-5p85.3681NM_002337
LRPAP1hsa-miR-6819-3p85.0856NM_002337
LRPAP1hsa-miR-6877-3p85.0856NM_002337
LRPAP1hsa-miR-319884.7585NM_002337
LRPAP1hsa-miR-128983.9639NM_002337
LRPAP1hsa-miR-93-5p83.6374NM_002337
LRPAP1hsa-miR-519d-3p83.6374NM_002337
LRPAP1hsa-miR-17-5p83.6374NM_002337
LRPAP1hsa-miR-20b-5p83.6374NM_002337
LRPAP1hsa-miR-526b-3p83.4934NM_002337
LRPAP1hsa-miR-106a-5p83.3758NM_002337
LRPAP1hsa-miR-4645-5p83.0847NM_002337
LRPAP1hsa-miR-55882.323NM_002337
LRPAP1hsa-miR-616-5p82.174NM_002337
LRPAP1hsa-miR-373-5p82.174NM_002337
LRPAP1hsa-miR-371b-5p82.174NM_002337
LRPAP1hsa-miR-570-3p82.109NM_002337
LRPAP1hsa-miR-569081.929NM_002337
LRPAP1hsa-miR-766-3p81.0469NM_002337
LRPAP1hsa-miR-6780a-5p80.7264NM_002337
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Motifs and transcription factors (TFs) regulating LRPAP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LRPAP1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
LRPAP1swissregulon__hs__CEBPBCEBPB (directAnnotation).
LRPAP1metacluster_21.5HOXB2; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF2; HSF2; HSF2; HSF2; HSF2; HSF2; HSF4; HSF4; HSF4 (directAnnotation). HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF1; HSF2; HSF2; HSF2; HSF2; HSF4; HSF4; HSF4; HSF4; HSF5; HSF5; HSF5; HSF5; HSFX1; HSFX1; HSFX1; HSFX1; HSFX2; HSFX2; HSFX2; HSFX2; HSFX3; HSFX3; HSFX3; HSFX3; HSFX4; HSFX4; HSFX4; HSFX4; HSFY1; HSFY1; HSFY1; HSFY1; HSFY2; HSFY2; HSFY2; HSFY2 (inferredBy_Orthology).
LRPAP1metacluster_161.31PRRX2 (directAnnotation).
LRPAP1metacluster_34.4ETS1; ETS1; ETS1; HCFC1; SIX5; SIX5; SIX5; SIX5; SMARCC2; SMARCC2; THAP11; THAP11; ZNF143; ZNF143; ZNF143; ZNF143 (directAnnotation). TBX2; THAP11; THAP11; ZNF143 (inferredBy_Orthology).
LRPAP1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
LRPAP1jaspar__MA1933.1SREBF2 (directAnnotation).
LRPAP1taipale_tf_pairs__ELK1_FOXI1_WGTTKMCGGAWRTN_CAPELK1; FOXI1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."