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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LRP12

Summary for LRP12

Gene informationGene symbol

LRP12

Ensembl ID

ENSG00000147650

Entrez ID

29967

Gene nameLDL receptor related protein 12
SynonymsFLJ12929|ST7
Gene typeprotein_coding
UniProtAcc

Q9Y561


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Dataset with differentially expressed gene: LRP12

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.361810.00e+00

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Expression of LRP12 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LRP12

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LRP12

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LRP12hsa-miR-3529-3p99.2085NM_001135703
LRP12hsa-miR-493-5p98.8912NM_001135703
LRP12hsa-miR-548at-5p98.3869NM_001135703
LRP12hsa-miR-316398.1748NM_001135703
LRP12hsa-miR-477597.5596NM_013437
LRP12hsa-let-7c-3p97.4422NM_001135703
LRP12hsa-miR-561-3p96.1528NM_001135703
LRP12hsa-miR-570-3p95.9461NM_013437
LRP12hsa-miR-340-5p94.8558NM_001135703
LRP12hsa-miR-5692a94.3588NM_001135703
LRP12hsa-miR-302c-5p92.3906NM_013437
LRP12hsa-miR-6772-3p92.2626NM_001135703
LRP12hsa-miR-432992.0394NM_001135703
LRP12hsa-miR-429191.9331NM_001135703
LRP12hsa-miR-5007-3p91.8033NM_013437
LRP12hsa-miR-480191.4589NM_001135703
LRP12hsa-miR-4645-3p91.3574NM_013437
LRP12hsa-miR-3620-3p91.357NM_001135703
LRP12hsa-miR-4685-3p91.1857NM_013437
LRP12hsa-miR-428791.1857NM_013437
LRP12hsa-miR-520e-5p91.1665NM_013437
LRP12hsa-miR-366090.7461NM_013437
LRP12hsa-miR-452690.7461NM_013437
LRP12hsa-miR-570090.1127NM_013437
LRP12hsa-miR-3121-3p90.05NM_001135703
LRP12hsa-miR-153-3p89.8998NM_001135703
LRP12hsa-miR-4731-3p89.558NM_001135703
LRP12hsa-miR-769-5p89.4496NM_001135703
LRP12hsa-miR-57789.1954NM_013437
LRP12hsa-let-7g-3p88.9859NM_001135703
LRP12hsa-let-7a-2-3p88.9859NM_001135703
LRP12hsa-miR-7-2-3p88.8977NM_001135703
LRP12hsa-miR-7-1-3p88.8977NM_001135703
LRP12hsa-miR-545-3p88.8538NM_013437
LRP12hsa-miR-548k88.7233NM_001135703
LRP12hsa-miR-548av-5p88.7233NM_001135703
LRP12hsa-miR-805488.7233NM_001135703
LRP12hsa-miR-186-5p88.4322NM_013437
LRP12hsa-miR-509388.0352NM_001135703
LRP12hsa-miR-3688-3p87.9574NM_001135703
LRP12hsa-miR-205487.4998NM_001135703
LRP12hsa-miR-524-5p87.121NM_001135703
LRP12hsa-miR-520d-5p87.121NM_001135703
LRP12hsa-miR-4671-3p87.1113NM_001135703
LRP12hsa-miR-454-3p86.6579NM_001135703
LRP12hsa-miR-153-5p86.3664NM_013437
LRP12hsa-miR-143-3p86.2713NM_013437
LRP12hsa-miR-608886.2713NM_013437
LRP12hsa-miR-477086.2713NM_013437
LRP12hsa-miR-428286.2299NM_013437
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Motifs and transcription factors (TFs) regulating LRP12

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LRP12metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
LRP12dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
LRP12metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
LRP12transfac_pro__M04826EP300 (directAnnotation).
LRP12taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
LRP12taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
LRP12metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
LRP12taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
LRP12transfac_pro__M00652NRF1 (directAnnotation).
LRP12hdpi__ETV4ETV4 (directAnnotation).
LRP12transfac_pro__M04866HDAC2 (directAnnotation).
LRP12jaspar__MA1122.1TFDP1 (directAnnotation).
LRP12swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
LRP12metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."