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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LIN7C

Summary for LIN7C

Gene informationGene symbol

LIN7C

Ensembl ID

ENSG00000148943

Entrez ID

55327

Gene namelin-7 homolog C, crumbs cell polarity complex component
SynonymsFLJ11215|LIN-7-C|LIN-7C|MALS-3|VELI3
Gene typeprotein_coding
UniProtAcc

Q9NUP9


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Dataset with differentially expressed gene: LIN7C

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2765250.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.2704073.10e-23

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Expression of LIN7C in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LIN7C

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LIN7C

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LIN7Chsa-miR-364699.9879NM_018362
LIN7Chsa-miR-548c-3p99.4439NM_018362
LIN7Chsa-miR-190a-3p99.4139NM_018362
LIN7Chsa-miR-10527-5p99.064NM_018362
LIN7Chsa-miR-5011-5p98.8366NM_018362
LIN7Chsa-miR-199a-5p97.9137NM_018362
LIN7Chsa-miR-199b-5p97.9137NM_018362
LIN7Chsa-miR-366297.5645NM_018362
LIN7Chsa-miR-548n96.9932NM_018362
LIN7Chsa-miR-22-3p96.3176NM_018362
LIN7Chsa-miR-1468-3p95.9584NM_018362
LIN7Chsa-miR-4659b-3p94.9225NM_018362
LIN7Chsa-miR-4659a-3p94.9225NM_018362
LIN7Chsa-miR-7156-3p94.8858NM_018362
LIN7Chsa-miR-3613-3p94.6753NM_018362
LIN7Chsa-miR-316393.2341NM_018362
LIN7Chsa-miR-548e-5p93.192NM_018362
LIN7Chsa-miR-302b-5p92.8966NM_018362
LIN7Chsa-miR-302d-5p92.8966NM_018362
LIN7Chsa-miR-7849-3p92.7015NM_018362
LIN7Chsa-miR-4477a92.005NM_018362
LIN7Chsa-miR-372-5p91.9124NM_018362
LIN7Chsa-miR-390891.6853NM_018362
LIN7Chsa-miR-805491.5053NM_018362
LIN7Chsa-miR-548k91.5053NM_018362
LIN7Chsa-miR-548av-5p91.5053NM_018362
LIN7Chsa-miR-469890.3509NM_018362
LIN7Chsa-miR-1252-3p89.8376NM_018362
LIN7Chsa-miR-3059-3p89.7497NM_018362
LIN7Chsa-miR-3680-3p89.2129NM_018362
LIN7Chsa-miR-365889.1557NM_018362
LIN7Chsa-miR-3145-3p89.0748NM_018362
LIN7Chsa-miR-6507-5p89.054NM_018362
LIN7Chsa-miR-433-3p88.0738NM_018362
LIN7Chsa-miR-4445-5p87.9198NM_018362
LIN7Chsa-miR-889-3p87.3591NM_018362
LIN7Chsa-miR-506-5p86.2898NM_018362
LIN7Chsa-miR-19b-1-5p85.7947NM_018362
LIN7Chsa-miR-19b-2-5p85.7947NM_018362
LIN7Chsa-miR-19a-5p85.7947NM_018362
LIN7Chsa-miR-548aj-3p85.3806NM_018362
LIN7Chsa-miR-548x-3p85.3806NM_018362
LIN7Chsa-miR-590-3p84.6453NM_018362
LIN7Chsa-miR-3927-5p84.4638NM_018362
LIN7Chsa-miR-194-5p84.448NM_018362
LIN7Chsa-miR-182584.3306NM_018362
LIN7Chsa-miR-124-5p84.3288NM_018362
LIN7Chsa-miR-513a-5p84.3263NM_018362
LIN7Chsa-miR-6848-3p84.0563NM_018362
LIN7Chsa-miR-6843-3p84.0563NM_018362
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Motifs and transcription factors (TFs) regulating LIN7C

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LIN7Cmetacluster_7.13ZFX (directAnnotation).
LIN7Cmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LIN7Cjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
LIN7Ckznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
LIN7Ctaipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."