DRMref Logo

Home

Download

Statistics

Landscape

Help

Contact

Center for Computational Systems Medicine
leaf

Gene summary

leaf

Datasets with differential expression of this gene

leaf

Expression of this gene in the resistant group across all datasets and cell types

leaf

Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

leaf

Known drug resistance mechanisms of this gene (This gene does not contain this module)

leaf

MicroRNAs (miRNAs) regulating this gene

leaf

Motifs and transcription factors (TFs) regulating this gene

leaf

Acts as a transcription factor (This gene does not contain this module)

leaf

Acts as a drug target

Gene: LIMK2

Summary for LIMK2

Gene informationGene symbol

LIMK2

Ensembl ID

ENSG00000182541

Entrez ID

3985

Gene nameLIM domain kinase 2
SynonymsNA
Gene typeprotein_coding
UniProtAcc

NA


Top

Dataset with differentially expressed gene: LIMK2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.3697071.99e-05

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.4757440.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3287070.00e+00

Top

Expression of LIMK2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

Top

Significant ligand-receptor pairs related to LIMK2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

Top

Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

Top

MicroRNAs (miRNA) regulating LIMK2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LIMK2hsa-miR-5011-5p98.26NM_001031801
LIMK2hsa-miR-132494.3982NM_005569
LIMK2hsa-miR-6799-5p92.9066NM_005569
LIMK2hsa-miR-6852-5p92.726NM_005569
LIMK2hsa-miR-190a-3p92.589NM_001031801
LIMK2hsa-miR-3925-3p89.911NM_005569
LIMK2hsa-miR-5580-5p89.8637NM_005569
LIMK2hsa-miR-4731-5p87.1335NM_005569
LIMK2hsa-miR-4796-3p85.3455NM_001031801
LIMK2hsa-miR-4668-3p82.0625NM_001031801
LIMK2hsa-miR-32-3p80.8946NM_016733
LIMK2hsa-miR-6825-5p80.4353NM_005569
LIMK2hsa-miR-6882-3p80.3476NM_005569
LIMK2hsa-miR-1212080.3387NM_001031801
LIMK2hsa-miR-6500-5p80.1343NM_005569
LIMK2hsa-miR-4633-3p80.1343NM_005569
Page: 1

Top

Motifs and transcription factors (TFs) regulating LIMK2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LIMK2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
LIMK2taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
LIMK2dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
LIMK2metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
LIMK2metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
LIMK2homer__TTCCKNAGAA_STAT6STAT6 (inferredBy_Orthology).
LIMK2transfac_pro__M01239RELA (directAnnotation).
LIMK2tfdimers__MD00143IKZF1; MZF1 (directAnnotation).
LIMK2metacluster_187.8ZNF22 (directAnnotation).
LIMK2kznf__ZNF124_Imbeault2017_RP_RCADEZNF124 (directAnnotation).
LIMK2metacluster_38.3STAT6; STAT6 (directAnnotation). STAT6; STAT6 (inferredBy_Orthology).
Page: 1

Top

Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

Top

Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
LIMK2"Fostamatinib"

DB12010

small molecule
Page: 1




1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."