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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LHX1

Summary for LHX1

Gene informationGene symbol

LHX1

Ensembl ID

ENSG00000274577

Entrez ID

3975

Gene nameLIM homeobox 1
SynonymsLIM-1|LIM1
Gene typeprotein_coding
UniProtAcc

P48742


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Dataset with differentially expressed gene: LHX1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells2.768675.95e-03

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.9074150.00e+00

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Expression of LHX1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LHX1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LHX1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LHX1hsa-miR-182-5p97.4119NM_005568
LHX1hsa-miR-4482-3p97.374NM_005568
LHX1hsa-miR-3927-3p97.3685NM_005568
LHX1hsa-miR-6831-5p96.7534NM_005568
LHX1hsa-miR-5011-5p95.8618NM_005568
LHX1hsa-miR-4650-3p94.1535NM_005568
LHX1hsa-miR-94392.2141NM_005568
LHX1hsa-miR-1277-5p91.6727NM_005568
LHX1hsa-miR-539-5p91.1457NM_005568
LHX1hsa-miR-30e-5p89.2609NM_005568
LHX1hsa-miR-30d-5p89.2609NM_005568
LHX1hsa-miR-30a-5p89.2609NM_005568
LHX1hsa-miR-340-5p89.0178NM_005568
LHX1hsa-miR-4700-3p86.9881NM_005568
LHX1hsa-miR-224-5p86.7388NM_005568
LHX1hsa-miR-211386.4745NM_005568
LHX1hsa-miR-30b-5p85.9833NM_005568
LHX1hsa-miR-30c-5p85.9833NM_005568
LHX1hsa-miR-1213385.2694NM_005568
LHX1hsa-miR-450b-5p83.4354NM_005568
LHX1hsa-miR-96-5p83.3176NM_005568
LHX1hsa-miR-3173-5p83.1045NM_005568
LHX1hsa-miR-4433a-5p82.5292NM_005568
LHX1hsa-miR-314382.4814NM_005568
LHX1hsa-miR-6818-5p81.8389NM_005568
LHX1hsa-miR-6799-3p81.5364NM_005568
LHX1hsa-miR-6867-5p81.5213NM_005568
LHX1hsa-miR-64681.3925NM_005568
LHX1hsa-miR-5009-5p81.2965NM_005568
LHX1hsa-miR-1271-5p81.1425NM_005568
LHX1hsa-miR-6750-3p81.1076NM_005568
LHX1hsa-miR-1212780.9123NM_005568
LHX1hsa-miR-1260b80.8649NM_005568
LHX1hsa-miR-1260a80.8649NM_005568
LHX1hsa-miR-1224-3p80.4442NM_005568
LHX1hsa-miR-805880.2766NM_005568
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Motifs and transcription factors (TFs) regulating LHX1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LHX1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1GMEB1 (directAnnotation).
LHX1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
LHX1transfac_pro__M02281SP1 (directAnnotation).
LHX1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
LHX1transfac_pro__M03876ZBTB33 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."