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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LAMP2

Summary for LAMP2

Gene informationGene symbol

LAMP2

Ensembl ID

ENSG00000005893

Entrez ID

3920

Gene namelysosomal associated membrane protein 2
SynonymsCD107b
Gene typeprotein_coding
UniProtAcc

P13473


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Dataset with differentially expressed gene: LAMP2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells-0.3112642.22e-07

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells-0.2746374.36e-06

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells-0.2852231.02e-11

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.3424292.52e-44

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.3848711.75e-14

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3205660.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.733480.00e+00

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Expression of LAMP2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LAMP2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

LAMP2

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating LAMP2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LAMP2hsa-miR-5011-5p99.7671NM_002294
LAMP2hsa-miR-848599.6074NM_013995
LAMP2hsa-miR-190a-3p99.5337NM_002294
LAMP2hsa-miR-6867-5p97.6235NM_002294
LAMP2hsa-miR-806897.1719NM_013995
LAMP2hsa-miR-302b-5p96.0269NM_001122606
LAMP2hsa-miR-616-5p95.8357NM_002294
LAMP2hsa-miR-373-5p95.8357NM_002294
LAMP2hsa-miR-371b-5p95.8357NM_002294
LAMP2hsa-miR-302d-5p95.0422NM_001122606
LAMP2hsa-miR-469894.7867NM_002294
LAMP2hsa-miR-450094.2408NM_002294
LAMP2hsa-miR-5195-3p92.9785NM_002294
LAMP2hsa-miR-145-5p92.9785NM_002294
LAMP2hsa-miR-4802-3p92.8083NM_013995
LAMP2hsa-let-7c-5p92.1596NM_002294
LAMP2hsa-let-7i-5p92.1596NM_002294
LAMP2hsa-let-7a-5p92.1596NM_002294
LAMP2hsa-let-7f-5p92.1596NM_002294
LAMP2hsa-let-7e-5p92.1596NM_002294
LAMP2hsa-let-7g-5p92.1596NM_002294
LAMP2hsa-let-7b-5p92.1596NM_002294
LAMP2hsa-miR-98-5p92.1596NM_002294
LAMP2hsa-miR-428291.176NM_002294
LAMP2hsa-miR-506-3p90.9241NM_002294
LAMP2hsa-miR-194-5p90.8692NM_013995
LAMP2hsa-miR-4666b90.5869NM_002294
LAMP2hsa-miR-4703-3p90.4307NM_013995
LAMP2hsa-miR-445889.6068NM_002294
LAMP2hsa-let-7d-5p89.6068NM_002294
LAMP2hsa-miR-427389.5163NM_001122606
LAMP2hsa-miR-3925-5p89.4912NM_002294
LAMP2hsa-miR-124-3p89.4479NM_002294
LAMP2hsa-miR-7156-5p89.1438NM_001122606
LAMP2hsa-let-7b-3p88.9424NM_013995
LAMP2hsa-miR-98-3p88.9424NM_013995
LAMP2hsa-let-7f-1-3p88.9424NM_013995
LAMP2hsa-let-7a-3p88.9424NM_013995
LAMP2hsa-miR-568888.93NM_001122606
LAMP2hsa-miR-1212488.3617NM_013995
LAMP2hsa-miR-6815-3p88.1897NM_002294
LAMP2hsa-miR-3529-3p87.7405NM_001122606
LAMP2hsa-miR-467287.5549NM_002294
LAMP2hsa-miR-495-3p87.117NM_001122606
LAMP2hsa-miR-450b-5p87.0195NM_001122606
LAMP2hsa-miR-397686.8445NM_002294
LAMP2hsa-miR-548t-3p86.1758NM_002294
LAMP2hsa-miR-548aa86.1758NM_002294
LAMP2hsa-miR-548ap-3p86.1758NM_002294
LAMP2hsa-miR-391585.9502NM_001122606
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Motifs and transcription factors (TFs) regulating LAMP2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LAMP2metacluster_7.13ZFX (directAnnotation).
LAMP2cisbp__M01863ZNF711 (inferredBy_Orthology).
LAMP2metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
LAMP2transfac_pro__M06071ZNF814 (directAnnotation).
LAMP2homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
LAMP2jaspar__MA0079.5SP1 (directAnnotation).
LAMP2cisbp__M00341PAX6 (directAnnotation).
LAMP2metacluster_198.3ZFP64 (directAnnotation).
LAMP2cisbp__M00788ZFY (inferredBy_Orthology).
LAMP2kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
LAMP2transfac_pro__M02844BCL6B (inferredBy_Orthology).
LAMP2metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
LAMP2transfac_pro__M04826EP300 (directAnnotation).
LAMP2taipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
LAMP2transfac_pro__M04862NRF1 (directAnnotation).
LAMP2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
LAMP2jaspar__MA0748.2YY2 (directAnnotation).
LAMP2taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
LAMP2taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
LAMP2taipale_tf_pairs__ETV5_HOXB13_NNCGGANGNNNTWAA_CAPETV5; HOXB13 (directAnnotation).
LAMP2jaspar__MA0502.2NFYB (directAnnotation).
LAMP2transfac_pro__M06601ZNF501 (directAnnotation).
LAMP2taipale_tf_pairs__CEBPG_ATF4_NNATGAYGCAAT_CAPATF4; CEBPG (directAnnotation).
LAMP2taipale_tf_pairs__HOXB2_PAX1_NNMATTAGTCACGCWTSRNTG_CAP_reprHOXB2; PAX1 (directAnnotation).
LAMP2transfac_pro__M06135ZNF28 (directAnnotation).
LAMP2transfac_pro__M04913ZBTB7A (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."