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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: LAMC2

Summary for LAMC2

Gene informationGene symbol

LAMC2

Ensembl ID

ENSG00000058085

Entrez ID

3918

Gene namelaminin subunit gamma 2
SynonymsBM600-100kDa|EBR2|EBR2A|kalinin-105kDa|LAMB2T|LAMNB2|nicein-100kDa
Gene typeprotein_coding
UniProtAcc

Q13753


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Dataset with differentially expressed gene: LAMC2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells0.9392526.35e-03

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Expression of LAMC2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LAMC2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LAMC2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LAMC2hsa-miR-432-3p94.3373NM_005562
LAMC2hsa-miR-95-5p92.5091NM_005562
LAMC2hsa-miR-539-5p90.8771NM_005562
LAMC2hsa-miR-4684-3p88.63NM_005562
LAMC2hsa-miR-888-5p88.072NM_005562
LAMC2hsa-miR-3156-3p87.2526NM_005562
LAMC2hsa-miR-3190-5p86.2079NM_005562
LAMC2hsa-miR-193b-3p85.4389NM_005562
LAMC2hsa-miR-193a-3p85.4389NM_005562
LAMC2hsa-miR-885-5p83.9406NM_005562
LAMC2hsa-miR-510-3p83.4528NM_005562
LAMC2hsa-miR-5004-5p83.2964NM_005562
LAMC2hsa-miR-660-5p81.0431NM_005562
LAMC2hsa-miR-4711-5p80.694NM_005562
LAMC2hsa-miR-442680.5714NM_005562
Page: 1

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Motifs and transcription factors (TFs) regulating LAMC2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LAMC2swissregulon__hs__CHD1CHD1 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."