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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: LAMA3

Summary for LAMA3

Gene informationGene symbol

LAMA3

Ensembl ID

ENSG00000053747

Entrez ID

3909

Gene namelaminin subunit alpha 3
SynonymsBM600-150kDa|epiligrin|kalinin-165kDa|LAMNA|nicein-150kDa
Gene typeprotein_coding
UniProtAcc

Q16787


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Dataset with differentially expressed gene: LAMA3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells1.350992.53e-03

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells0.4312510.00e+00

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Expression of LAMA3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to LAMA3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating LAMA3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
LAMA3hsa-miR-302c-5p99.2083NM_001127718
LAMA3hsa-miR-477598.7166NM_001127718
LAMA3hsa-miR-520f-3p96.9156NM_000227
LAMA3hsa-miR-520b-3p96.7894NM_000227
LAMA3hsa-miR-520d-3p96.7894NM_000227
LAMA3hsa-miR-520c-3p96.7894NM_000227
LAMA3hsa-miR-372-3p96.7894NM_000227
LAMA3hsa-miR-373-3p96.7894NM_000227
LAMA3hsa-miR-520e-3p96.7894NM_000227
LAMA3hsa-miR-302b-3p96.7894NM_000227
LAMA3hsa-miR-302c-3p96.7894NM_000227
LAMA3hsa-miR-302a-3p96.7894NM_000227
LAMA3hsa-miR-302d-3p96.7894NM_000227
LAMA3hsa-miR-520a-3p96.7894NM_000227
LAMA3hsa-miR-302e96.4999NM_000227
LAMA3hsa-miR-106b-5p95.3932NM_000227
LAMA3hsa-miR-20a-5p95.3932NM_000227
LAMA3hsa-miR-526b-3p95.1033NM_000227
LAMA3hsa-miR-20b-5p95.1033NM_000227
LAMA3hsa-miR-106a-5p95.1033NM_000227
LAMA3hsa-miR-93-5p95.1033NM_000227
LAMA3hsa-miR-519d-3p95.1033NM_000227
LAMA3hsa-miR-17-5p95.1033NM_000227
LAMA3hsa-miR-6801-5p93.0698NM_001127718
LAMA3hsa-miR-10393-3p93.0698NM_001127718
LAMA3hsa-miR-548ah-5p91.8001NM_000227
LAMA3hsa-miR-3140-3p91.7482NM_001127718
LAMA3hsa-miR-360991.4666NM_000227
LAMA3hsa-miR-4796-3p90.9831NM_000227
LAMA3hsa-miR-1211588.0255NM_001127718
LAMA3hsa-miR-3681-5p88.0255NM_001127718
LAMA3hsa-miR-58787.1812NM_001127718
LAMA3hsa-miR-316386.9154NM_001127718
LAMA3hsa-miR-556-3p86.4495NM_000227
LAMA3hsa-miR-6849-5p85.2676NM_001127718
LAMA3hsa-miR-612482.3536NM_001127718
LAMA3hsa-miR-500a-5p81.0427NM_001127718
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Motifs and transcription factors (TFs) regulating LAMA3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
LAMA3kznf__ZNF594_Schmitges2016_RCADEZNF594 (directAnnotation).
LAMA3kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
LAMA3taipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
LAMA3transfac_pro__M00716ZBTB14 (directAnnotation).
LAMA3hdpi__HIP2UBE2K (directAnnotation).
LAMA3taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
LAMA3metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
LAMA3metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
LAMA3transfac_pro__M05981ZNF233 (directAnnotation).
LAMA3taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
LAMA3transfac_pro__M04950EGR1 (directAnnotation).
LAMA3transfac_pro__M06109ZNF254 (directAnnotation).
LAMA3metacluster_7.7SP2 (directAnnotation). KLF16 (inferredBy_Orthology).
LAMA3transfac_pro__M06135ZNF28 (directAnnotation).
LAMA3metacluster_172.6CHD2; E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
LAMA3"Lanoteplase"

DB06245

biotech
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."