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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: KHSRP

Summary for KHSRP

Gene informationGene symbol

KHSRP

Ensembl ID

ENSG00000088247

Entrez ID

8570

Gene nameKH-type splicing regulatory protein
SynonymsFBP2|FUBP2|KSRP
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: KHSRP

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.6181230.00e+00

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.2968240.00e+00

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.6668750.00e+00

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Expression of KHSRP in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KHSRP

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KHSRP

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KHSRPhsa-miR-5011-5p99.9079NM_003685
KHSRPhsa-miR-190a-3p97.4065NM_003685
KHSRPhsa-miR-6835-3p96.9165NM_003685
KHSRPhsa-miR-4694-3p95.5919NM_003685
KHSRPhsa-miR-477594.7729NM_003685
KHSRPhsa-miR-361193.9319NM_003685
KHSRPhsa-miR-7156-5p92.7221NM_003685
KHSRPhsa-miR-314892.5505NM_003685
KHSRPhsa-miR-3688-3p92.0335NM_003685
KHSRPhsa-miR-427392.0319NM_003685
KHSRPhsa-miR-1213691.8457NM_003685
KHSRPhsa-miR-990391.5985NM_003685
KHSRPhsa-miR-6878-5p91.0408NM_003685
KHSRPhsa-miR-1277-5p88.2425NM_003685
KHSRPhsa-miR-568387.5639NM_003685
KHSRPhsa-miR-4670-3p86.4416NM_003685
KHSRPhsa-miR-561-3p86.0987NM_003685
KHSRPhsa-miR-1245b-3p85.4209NM_003685
KHSRPhsa-miR-3613-3p85.2402NM_003685
KHSRPhsa-miR-27a-3p85.1762NM_003685
KHSRPhsa-miR-27b-3p85.1762NM_003685
KHSRPhsa-miR-4728-5p84.7597NM_003685
KHSRPhsa-miR-6785-5p82.0187NM_003685
KHSRPhsa-miR-589-3p81.8947NM_003685
KHSRPhsa-miR-998580.9799NM_003685
KHSRPhsa-miR-513a-5p80.9799NM_003685
KHSRPhsa-miR-149-3p80.6165NM_003685
KHSRPhsa-miR-6883-5p80.6165NM_003685
KHSRPhsa-miR-6778-5p80.3598NM_003685
KHSRPhsa-miR-1233-5p80.3598NM_003685
KHSRPhsa-miR-590-3p80.3322NM_003685
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Motifs and transcription factors (TFs) regulating KHSRP

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KHSRPmetacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
KHSRPmetacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
KHSRPhdpi__ETV4ETV4 (directAnnotation).
KHSRPswissregulon__hs__ELF2ELF2 (directAnnotation).
KHSRPjaspar__MA0502.2NFYB (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
KHSRP"Artenimol"

DB11638

small molecule
KHSRP"Resveratrol"

DB02709

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."