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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KHDC4

Summary for KHDC4

Gene informationGene symbol

KHDC4

Ensembl ID

ENSG00000132680

Entrez ID

22889

Gene nameKH domain containing 4, pre-mRNA splicing factor
SynonymsBLOM7|KIAA0907|SNORA80EHG
Gene typeprotein_coding
UniProtAcc

Q7Z7F0


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Dataset with differentially expressed gene: KHDC4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postpDCs-0.4975755.14e-03

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Expression of KHDC4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KHDC4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KHDC4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KHDC4hsa-miR-3158-5p97.7722NM_014949
KHDC4hsa-miR-137-3p96.9682NM_014949
KHDC4hsa-miR-4639-5p96.9327NM_014949
KHDC4hsa-miR-19b-3p96.3704NM_014949
KHDC4hsa-miR-19a-3p96.3704NM_014949
KHDC4hsa-miR-3529-3p96.0507NM_014949
KHDC4hsa-miR-7853-5p92.5698NM_014949
KHDC4hsa-miR-105-5p92.5698NM_014949
KHDC4hsa-miR-509-3-5p92.4625NM_014949
KHDC4hsa-miR-509-5p92.4625NM_014949
KHDC4hsa-miR-4699-3p92.2954NM_014949
KHDC4hsa-miR-448090.7425NM_014949
KHDC4hsa-miR-807090.2798NM_014949
KHDC4hsa-miR-6817-3p89.3767NM_014949
KHDC4hsa-miR-441888.962NM_014949
KHDC4hsa-miR-324-3p88.8165NM_014949
KHDC4hsa-miR-428688.2568NM_014949
KHDC4hsa-miR-1213687.6155NM_014949
KHDC4hsa-miR-195-3p86.98NM_014949
KHDC4hsa-miR-16-2-3p86.98NM_014949
KHDC4hsa-miR-182-5p86.9291NM_014949
KHDC4hsa-miR-548at-5p86.374NM_014949
KHDC4hsa-miR-3192-5p85.556NM_014949
KHDC4hsa-miR-58684.9141NM_014949
KHDC4hsa-miR-425284.6759NM_014949
KHDC4hsa-miR-60184.5106NM_014949
KHDC4hsa-miR-29883.5382NM_014949
KHDC4hsa-miR-5582-3p83.1673NM_014949
KHDC4hsa-miR-432881.8079NM_014949
KHDC4hsa-miR-3194-5p81.3667NM_014949
KHDC4hsa-miR-548aw81.0855NM_014949
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Motifs and transcription factors (TFs) regulating KHDC4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."