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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KDM4A

Summary for KDM4A

Gene informationGene symbol

KDM4A

Ensembl ID

ENSG00000066135

Entrez ID

9682

Gene namelysine demethylase 4A
SynonymsJHDM3A|JMJD2|JMJD2A|KIAA0677|TDRD14A
Gene typeprotein_coding
UniProtAcc

O75164


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Dataset with differentially expressed gene: KDM4A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.3143826.37e-26

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Expression of KDM4A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KDM4A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KDM4A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KDM4Ahsa-miR-366597.7293NM_014663
KDM4Ahsa-miR-6736-3p96.7325NM_014663
KDM4Ahsa-miR-3173-5p94.4102NM_014663
KDM4Ahsa-miR-6799-3p94.4102NM_014663
KDM4Ahsa-miR-7-2-3p93.7077NM_014663
KDM4Ahsa-miR-7-1-3p93.7077NM_014663
KDM4Ahsa-miR-10526-3p93.6991NM_014663
KDM4Ahsa-miR-4725-3p93.4008NM_014663
KDM4Ahsa-miR-6780b-5p93.4008NM_014663
KDM4Ahsa-miR-427193.4008NM_014663
KDM4Ahsa-miR-137-3p93.2803NM_014663
KDM4Ahsa-miR-4639-5p92.1385NM_014663
KDM4Ahsa-miR-848591.9472NM_014663
KDM4Ahsa-miR-5002-5p91.8081NM_014663
KDM4Ahsa-miR-874-3p91.7252NM_014663
KDM4Ahsa-miR-659-3p91.5721NM_014663
KDM4Ahsa-miR-29b-2-5p91.3263NM_014663
KDM4Ahsa-miR-425590.7919NM_014663
KDM4Ahsa-miR-125a-3p87.622NM_014663
KDM4Ahsa-miR-568887.1065NM_014663
KDM4Ahsa-miR-429086.9341NM_014663
KDM4Ahsa-miR-65786.2609NM_014663
KDM4Ahsa-miR-495-3p86.0328NM_014663
KDM4Ahsa-miR-1224-3p85.9582NM_014663
KDM4Ahsa-miR-808085.9457NM_014663
KDM4Ahsa-miR-6787-3p85.2853NM_014663
KDM4Ahsa-miR-23a-3p84.9015NM_014663
KDM4Ahsa-miR-23b-3p84.9015NM_014663
KDM4Ahsa-miR-23c84.9015NM_014663
KDM4Ahsa-miR-509-5p83.4146NM_014663
KDM4Ahsa-miR-509-3-5p83.4146NM_014663
KDM4Ahsa-miR-3130-3p83.3371NM_014663
KDM4Ahsa-miR-299-5p82.1743NM_014663
KDM4Ahsa-miR-6756-3p81.4826NM_014663
KDM4Ahsa-miR-441880.2225NM_014663
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Motifs and transcription factors (TFs) regulating KDM4A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KDM4Ametacluster_174.3MBD2; NFYA; NFYB; NFYC; PBX3 (directAnnotation).
KDM4Ametacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
KDM4Ametacluster_174.6NFYA; NFYB; NFYB; NFYC (directAnnotation).
KDM4Ajaspar__MA0502.2NFYB (directAnnotation).
KDM4Acisbp__M01863ZNF711 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."