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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KCTD3

Summary for KCTD3

Gene informationGene symbol

KCTD3

Ensembl ID

ENSG00000136636

Entrez ID

51133

Gene namepotassium channel tetramerization domain containing 3
SynonymsNY-REN-45
Gene typeprotein_coding
UniProtAcc

Q9Y597


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Dataset with differentially expressed gene: KCTD3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3090880.00e+00

GSE104987

MCF7 cell lineCell lineBreast cancerER+ breast cancerTargeted therapyKDM5-C70NAMalignant cells-0.2531311.86e-08

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Expression of KCTD3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KCTD3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KCTD3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KCTD3hsa-miR-364697.7067NM_001319294
KCTD3hsa-miR-425594.583NM_001319294
KCTD3hsa-miR-153-5p94.2614NM_001319294
KCTD3hsa-miR-561-3p93.3963NM_001319294
KCTD3hsa-miR-4639-5p89.507NM_001319294
KCTD3hsa-miR-6891-3p86.1069NM_001319294
KCTD3hsa-miR-607286.1069NM_001319294
KCTD3hsa-miR-122b-5p85.8863NM_001319294
KCTD3hsa-miR-568285.8652NM_001319294
KCTD3hsa-miR-141-3p85.4482NM_001319294
KCTD3hsa-miR-200a-3p85.4482NM_001319294
KCTD3hsa-miR-190b-3p84.8553NM_001319294
KCTD3hsa-miR-513b-3p81.1569NM_001319294
KCTD3hsa-miR-548m81.1489NM_001319294
KCTD3hsa-miR-4652-3p80.2825NM_001319294
Page: 1

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Motifs and transcription factors (TFs) regulating KCTD3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KCTD3homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
KCTD3taipale_tf_pairs__GCM1_SPDEF_RTRSKGGCGGANNNNNNATCCNNN_CAP_reprGCM1; SPDEF (directAnnotation).
KCTD3metacluster_172.23ZBTB32; ZBTB32 (directAnnotation).
KCTD3taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
KCTD3transfac_pro__M00652NRF1 (directAnnotation).
KCTD3transfac_pro__M04866HDAC2 (directAnnotation).
KCTD3jaspar__MA1122.1TFDP1 (directAnnotation).
Page: 1

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."