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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KCTD1

Summary for KCTD1

Gene informationGene symbol

KCTD1

Ensembl ID

ENSG00000134504

Entrez ID

284252

Gene namepotassium channel tetramerization domain containing 1
SynonymsC18orf5
Gene typeprotein_coding
UniProtAcc

Q719H9


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Dataset with differentially expressed gene: KCTD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.3485480.00e+00

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Expression of KCTD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KCTD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KCTD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KCTD1hsa-miR-190a-3p99.9884NM_001136205
KCTD1hsa-miR-5011-5p99.9679NM_001136205
KCTD1hsa-miR-651-3p99.1066NM_001258221
KCTD1hsa-miR-3680-3p98.6632NM_001136205
KCTD1hsa-miR-655-3p95.6103NM_001258221
KCTD1hsa-miR-374c-5p95.6103NM_001258221
KCTD1hsa-miR-4797-5p95.3279NM_001136205
KCTD1hsa-miR-450b-5p95.2455NM_001136205
KCTD1hsa-miR-9983-3p94.779NM_001258221
KCTD1hsa-miR-50794.2918NM_001136205
KCTD1hsa-miR-314893.3361NM_001258221
KCTD1hsa-miR-129-5p93.1616NM_001258221
KCTD1hsa-miR-807192.8887NM_001136205
KCTD1hsa-miR-55792.3597NM_001136205
KCTD1hsa-miR-4711-3p92.309NM_001136205
KCTD1hsa-miR-316391.9184NM_001258221
KCTD1hsa-miR-368591.8867NM_001136205
KCTD1hsa-miR-428291.6159NM_001258221
KCTD1hsa-miR-6834-3p89.705NM_001136205
KCTD1hsa-miR-6832-3p89.2416NM_001258221
KCTD1hsa-miR-452889.1872NM_001258221
KCTD1hsa-miR-4761-5p85.4528NM_001136205
KCTD1hsa-miR-3606-3p85.2842NM_001258221
KCTD1hsa-miR-513c-3p85.2842NM_001258221
KCTD1hsa-miR-513a-3p85.2842NM_001258221
KCTD1hsa-miR-44884.6522NM_001136205
KCTD1hsa-miR-432883.6921NM_001258221
KCTD1hsa-miR-514b-3p81.8946NM_001258221
KCTD1hsa-miR-514a-3p81.8946NM_001258221
KCTD1hsa-miR-6847-3p81.5736NM_001258221
KCTD1hsa-miR-613481.5523NM_001258221
KCTD1hsa-miR-153-3p81.4819NM_001136205
KCTD1hsa-miR-6747-3p81.4545NM_001136205
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Motifs and transcription factors (TFs) regulating KCTD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KCTD1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
KCTD1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
KCTD1taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
KCTD1dbtfbs__E2F8_representative_N1E2F8 (directAnnotation).
KCTD1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
KCTD1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
KCTD1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
KCTD1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
KCTD1taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
KCTD1metacluster_197.2E2F4; E2F7; E2F7; E2F7; E2F8; E2F8 (directAnnotation).
KCTD1taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
KCTD1hdpi__ETV4ETV4 (directAnnotation).
KCTD1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
KCTD1transfac_pro__M04866HDAC2 (directAnnotation).
KCTD1jaspar__MA1122.1TFDP1 (directAnnotation).
KCTD1taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
KCTD1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
KCTD1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."