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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: KCNH2

Summary for KCNH2

Gene informationGene symbol

KCNH2

Ensembl ID

ENSG00000055118

Entrez ID

3757

Gene namepotassium voltage-gated channel subfamily H member 2
Synonymserg1|HERG|Kv11.1|LQT2
Gene typeprotein_coding
UniProtAcc

Q12809


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Dataset with differentially expressed gene: KCNH2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes-0.3667221.82e-09

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostErythrocytes-0.6279270.00e+00

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells-1.147080.00e+00

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Expression of KCNH2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KCNH2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KCNH2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KCNH2hsa-miR-94499.4723NM_000238
KCNH2hsa-miR-1212399.1036NM_000238
KCNH2hsa-miR-4795-3p89.8723NM_000238
KCNH2hsa-miR-6851-3p89.6138NM_001204798
KCNH2hsa-miR-227886.3909NM_000238
KCNH2hsa-miR-444786.3892NM_001204798
KCNH2hsa-miR-5007-3p86.1471NM_000238
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Motifs and transcription factors (TFs) regulating KCNH2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KCNH2hdpi__NFIXNFIX (directAnnotation).
KCNH2jaspar__MA1106.1HIF1A (directAnnotation).
KCNH2transfac_pro__M05768ZNF544 (directAnnotation).
KCNH2transfac_pro__M02843BBX (inferredBy_Orthology).
KCNH2hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
KCNH2metacluster_141.4GLIS2 (directAnnotation).
KCNH2cisbp__M02645ETS1 (directAnnotation).
KCNH2transfac_pro__M06258ZNF345 (directAnnotation).
KCNH2metacluster_141.2E2F2; E2F3 (directAnnotation).
KCNH2transfac_pro__M04844MAX (directAnnotation).
KCNH2metacluster_174.2CEBPZ; CEBPZ; DRAP1; FOS; FOXI1; FOXI1; HMGXB3; IRF3; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYA; NFYB; NFYB; NFYB; NFYB; NFYB; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; NFYC; PBX3; PBX3; SP2 (directAnnotation). NFYA; NFYA; NFYC; PBX1; PBX3 (inferredBy_Orthology).
KCNH2transfac_pro__M06130ZNF254 (directAnnotation).
KCNH2transfac_pro__M06487ZNF695 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
KCNH2"Amsacrine"

DB00276

small molecule
KCNH2"Astemizole"

DB00637

small molecule
KCNH2"Azimilide"

DB04957

small molecule
KCNH2"Bepridil"

DB01244

small molecule
KCNH2"Carvedilol"

DB01136

small molecule
KCNH2"Chlorobutanol"

DB11386

small molecule
KCNH2"Chlorpromazine"

DB00477

small molecule
KCNH2"Ciprofloxacin"

DB00537

small molecule
KCNH2"Cisapride"

DB00604

small molecule
KCNH2"Clarithromycin"

DB01211

small molecule
KCNH2"Disopyramide"

DB00280

small molecule
KCNH2"Dofetilide"

DB00204

small molecule
KCNH2"Doxepin"

DB01142

small molecule
KCNH2"Dronedarone"

DB04855

small molecule
KCNH2"Erythromycin"

DB00199

small molecule
KCNH2"Flecainide"

DB01195

small molecule
KCNH2"Fluoxetine"

DB00472

small molecule
KCNH2"Fluvoxamine"

DB00176

small molecule
KCNH2"Halofantrine"

DB01218

small molecule
KCNH2"Hydroxyzine"

DB00557

small molecule
KCNH2"Ibutilide"

DB00308

small molecule
KCNH2"Imipramine"

DB00458

small molecule
KCNH2"Isavuconazole"

DB11633

small molecule
KCNH2"Ketoconazole"

DB01026

small molecule
KCNH2"Loperamide"

DB00836

small molecule
KCNH2"Loratadine"

DB00455

small molecule
KCNH2"Nefazodone"

DB01149

small molecule
KCNH2"Pentoxyverine"

DB11186

small molecule
KCNH2"Perhexiline"

DB01074

small molecule
KCNH2"Phenytoin"

DB00252

small molecule
KCNH2"Pimozide"

DB01100

small molecule
KCNH2"Pitolisant"

DB11642

small molecule
KCNH2"Potassium nitrate"

DB11090

small molecule
KCNH2"Prazosin"

DB00457

small molecule
KCNH2"Procainamide"

DB01035

small molecule
KCNH2"Propafenone"

DB01182

small molecule
KCNH2"Quinidine"

DB00908

small molecule
KCNH2"Sertindole"

DB06144

small molecule
KCNH2"Sotalol"

DB00489

small molecule
KCNH2"Tamoxifen"

DB00675

small molecule
KCNH2"Tecastemizole"

DB06457

small molecule
KCNH2"Terazosin"

DB01162

small molecule
KCNH2"Terfenadine"

DB00342

small molecule
KCNH2"Thioridazine"

DB00679

small molecule
KCNH2"Verapamil"

DB00661

small molecule
KCNH2"Vernakalant"

DB06217

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."