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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: KCMF1

Summary for KCMF1

Gene informationGene symbol

KCMF1

Ensembl ID

ENSG00000176407

Entrez ID

56888

Gene namepotassium channel modulatory factor 1
SynonymsDEBT91|DKFZP434L1021|PCMF|ZZZ1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: KCMF1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE186960

Panc1 cell lineCell linePancreatic cancerPancreatic ductal adenocarcinoma (PDAC)ChemotherapygemcitabineNAMalignant cells0.5260730.00e+00

GSE131984_JQ1Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapyJQ1 + paclitaxelNAMalignant cells-0.2599711.33e-06

GSE108397

451Lu cell lineCell lineMelanomaMelanomaTargeted therapyPLX-4720NAMalignant cells-0.3559330.00e+00

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Expression of KCMF1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to KCMF1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating KCMF1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
KCMF1hsa-miR-1212399.5238NM_020122
KCMF1hsa-miR-6505-3p96.7363NM_020122
KCMF1hsa-miR-428895.6967NM_020122
KCMF1hsa-miR-6740-3p95.5621NM_020122
KCMF1hsa-miR-364695.4038NM_020122
KCMF1hsa-miR-568895.1861NM_020122
KCMF1hsa-miR-495-3p94.3628NM_020122
KCMF1hsa-miR-63293.3588NM_020122
KCMF1hsa-miR-4700-3p93.356NM_020122
KCMF1hsa-miR-6733-5p93.2583NM_020122
KCMF1hsa-miR-6739-5p93.2583NM_020122
KCMF1hsa-miR-548ao-5p92.764NM_020122
KCMF1hsa-miR-548ax92.764NM_020122
KCMF1hsa-miR-5692a92.7421NM_020122
KCMF1hsa-miR-477592.6516NM_020122
KCMF1hsa-miR-34692.209NM_020122
KCMF1hsa-miR-877-3p92.0915NM_020122
KCMF1hsa-miR-5011-5p91.3717NM_020122
KCMF1hsa-miR-664a-3p91.3064NM_020122
KCMF1hsa-miR-315391.2778NM_020122
KCMF1hsa-miR-548x-3p91.1589NM_020122
KCMF1hsa-miR-548aj-3p91.1589NM_020122
KCMF1hsa-miR-3622b-3p91.1465NM_020122
KCMF1hsa-miR-3622a-3p91.1465NM_020122
KCMF1hsa-miR-4735-3p91.0654NM_020122
KCMF1hsa-miR-548j-3p90.8727NM_020122
KCMF1hsa-miR-548aq-3p90.8727NM_020122
KCMF1hsa-miR-548ae-3p90.8727NM_020122
KCMF1hsa-miR-548ah-3p90.8727NM_020122
KCMF1hsa-miR-548am-3p90.8727NM_020122
KCMF1hsa-miR-4666b90.3935NM_020122
KCMF1hsa-miR-132-3p89.8799NM_020122
KCMF1hsa-miR-212-3p89.8799NM_020122
KCMF1hsa-miR-509389.4584NM_020122
KCMF1hsa-miR-18a-5p89.3287NM_020122
KCMF1hsa-miR-18b-5p89.3287NM_020122
KCMF1hsa-miR-3140-5p88.6748NM_020122
KCMF1hsa-miR-1211788.6628NM_020122
KCMF1hsa-miR-1468-3p87.5852NM_020122
KCMF1hsa-miR-4711-3p87.1274NM_020122
KCMF1hsa-miR-379-3p87.0681NM_020122
KCMF1hsa-miR-411-3p87.0681NM_020122
KCMF1hsa-miR-95-5p86.5424NM_020122
KCMF1hsa-miR-432885.7153NM_020122
KCMF1hsa-miR-315985.224NM_020122
KCMF1hsa-miR-49685.064NM_020122
KCMF1hsa-miR-302c-5p84.9736NM_020122
KCMF1hsa-miR-7847-3p84.1484NM_020122
KCMF1hsa-miR-576-5p83.0541NM_020122
KCMF1hsa-miR-6833-3p82.5315NM_020122
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Motifs and transcription factors (TFs) regulating KCMF1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
KCMF1metacluster_7.13ZFX (directAnnotation).
KCMF1cisbp__M01863ZNF711 (inferredBy_Orthology).
KCMF1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
KCMF1jaspar__MA1483.2ELF2 (directAnnotation).
KCMF1metacluster_151.2ZNF23 (directAnnotation).
KCMF1metacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
KCMF1transfac_pro__M05479ZNF580 (directAnnotation).
KCMF1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
KCMF1kznf__ZNF783_Imbeault2017_OM_MEMEZNF783 (directAnnotation).
KCMF1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
KCMF1metacluster_182.10ZFX (directAnnotation).
KCMF1hdpi__ETV4ETV4 (directAnnotation).
KCMF1jaspar__MA0748.2YY2 (directAnnotation).
KCMF1homer__TWVGGTCCGC_HINFPHINFP (directAnnotation).
KCMF1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
KCMF1jaspar__MA0079.5SP1 (directAnnotation).
KCMF1taipale_tf_pairs__GCM1_ETV1_RTRNNGGCGGAAGTN_CAPETV1; GCM1 (directAnnotation).
KCMF1metacluster_144.8ZNF30; ZNF30 (directAnnotation).
KCMF1tfdimers__MD00154MZF1; SREBF1 (directAnnotation).
KCMF1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
KCMF1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
KCMF1cisbp__M00249WT1 (directAnnotation).
KCMF1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
KCMF1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
KCMF1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
KCMF1kznf__ZNF571_Imbeault2017_OM_RCADEZNF571 (directAnnotation).
KCMF1metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
KCMF1metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
KCMF1metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
KCMF1metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
KCMF1metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
KCMF1taipale_tf_pairs__ELF2_NATGCGGAAGTR_HTELF2 (directAnnotation).
KCMF1taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
KCMF1taipale_tf_pairs__ETV2_RFX5_NNNTTCCGSNNNNGCAACNN_CAP_reprETV2; RFX5 (directAnnotation).
KCMF1jaspar__MA1708.1ETV7 (directAnnotation).
KCMF1taipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
KCMF1hdpi__ELF2ELF2 (directAnnotation).
KCMF1swissregulon__hs__ELK1ELK1 (directAnnotation).
KCMF1taipale_tf_pairs__FOXO1_ELK1_TGTTGCCGGANNN_CAPELK1; FOXO1 (directAnnotation).
KCMF1metacluster_183.4ETS1 (inferredBy_Orthology).
KCMF1metacluster_81.7CREB1 (directAnnotation).
KCMF1taipale_tf_pairs__ETV5_HOXB13_NNCGGANGNNNTWAA_CAPETV5; HOXB13 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."