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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: IRX3

Summary for IRX3

Gene informationGene symbol

IRX3

Ensembl ID

ENSG00000177508

Entrez ID

79191

Gene nameiroquois homeobox 3
SynonymsIRX-1
Gene typeprotein_coding
UniProtAcc

P78415


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Dataset with differentially expressed gene: IRX3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.4898010.00e+00

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postMalignant cells0.2674374.56e-04

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Expression of IRX3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to IRX3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating IRX3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
IRX3hsa-miR-98-3p95.9053NM_024336
IRX3hsa-let-7a-3p95.9053NM_024336
IRX3hsa-let-7f-1-3p95.9053NM_024336
IRX3hsa-let-7b-3p95.9053NM_024336
IRX3hsa-miR-4789-5p95.2941NM_024336
IRX3hsa-miR-1185-2-3p94.7024NM_024336
IRX3hsa-miR-1185-1-3p94.7024NM_024336
IRX3hsa-let-7f-2-3p93.9992NM_024336
IRX3hsa-miR-4662a-5p93.8876NM_024336
IRX3hsa-miR-4666a-3p91.7304NM_024336
IRX3hsa-miR-6885-3p89.7726NM_024336
IRX3hsa-miR-659-3p88.8695NM_024336
IRX3hsa-miR-684487.6147NM_024336
IRX3hsa-miR-6509-5p86.6047NM_024336
IRX3hsa-miR-472984.9563NM_024336
IRX3hsa-miR-377-3p82.8895NM_024336
IRX3hsa-miR-1304-3p82.7952NM_024336
IRX3hsa-miR-7849-3p81.5519NM_024336
IRX3hsa-miR-493-5p81.184NM_024336
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Motifs and transcription factors (TFs) regulating IRX3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
IRX3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
IRX3hocomoco__TYY2_HUMAN.H11MO.0.DYY2 (directAnnotation).
IRX3cisbp__M00341PAX6 (directAnnotation).
IRX3kznf__ZNF846_Imbeault2017_OM_MEMEZNF846 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
IRX3metacluster_175.5upMalignant cells

GSE207422_Tor

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."