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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: INPP4A

Summary for INPP4A

Gene informationGene symbol

INPP4A

Ensembl ID

ENSG00000040933

Entrez ID

3631

Gene nameinositol polyphosphate-4-phosphatase type I A
SynonymsINPP4
Gene typeprotein_coding
UniProtAcc

Q96PE3


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Dataset with differentially expressed gene: INPP4A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells0.2644990.00e+00

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Expression of INPP4A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to INPP4A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating INPP4A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
INPP4Ahsa-miR-548bb-3p99.0419NM_001134225
INPP4Ahsa-miR-548d-3p98.9106NM_001134225
INPP4Ahsa-miR-548ac98.9106NM_001134225
INPP4Ahsa-miR-548z98.9106NM_001134225
INPP4Ahsa-miR-548h-3p98.9106NM_001134225
INPP4Ahsa-miR-190a-3p98.7122NM_001134224
INPP4Ahsa-miR-5011-5p98.6783NM_001134224
INPP4Ahsa-miR-428094.6227NM_001134225
INPP4Ahsa-miR-204-5p93.8663NM_001134224
INPP4Ahsa-miR-211-5p93.8663NM_001134224
INPP4Ahsa-miR-548an93.814NM_001134224
INPP4Ahsa-miR-4690-5p92.2138NM_001134225
INPP4Ahsa-miR-548m91.9743NM_001134225
INPP4Ahsa-miR-205-5p91.9309NM_001134224
INPP4Ahsa-miR-4760-3p91.7039NM_001134225
INPP4Ahsa-miR-223-3p91.1355NM_001134224
INPP4Ahsa-miR-463590.4225NM_001134224
INPP4Ahsa-miR-3606-5p89.5721NM_001134224
INPP4Ahsa-miR-316389.5541NM_001134224
INPP4Ahsa-miR-447588.9082NM_001134225
INPP4Ahsa-miR-548aa88.6143NM_001134225
INPP4Ahsa-miR-548ap-3p88.6143NM_001134225
INPP4Ahsa-miR-548t-3p88.6143NM_001134225
INPP4Ahsa-miR-3117-5p88.547NM_001134225
INPP4Ahsa-miR-10522-5p88.4412NM_001134224
INPP4Ahsa-miR-7845-5p87.8913NM_001134224
INPP4Ahsa-miR-942-3p87.6519NM_001134224
INPP4Ahsa-miR-548aj-3p87.4933NM_001134225
INPP4Ahsa-miR-548x-3p87.4933NM_001134225
INPP4Ahsa-miR-471987.3609NM_001134224
INPP4Ahsa-miR-30e-5p86.3548NM_001134224
INPP4Ahsa-miR-30c-5p86.3548NM_001134224
INPP4Ahsa-miR-30b-5p86.3548NM_001134224
INPP4Ahsa-miR-30d-5p86.3548NM_001134224
INPP4Ahsa-miR-30a-5p86.3548NM_001134224
INPP4Ahsa-miR-548am-3p86.197NM_001134225
INPP4Ahsa-miR-548ah-3p86.197NM_001134225
INPP4Ahsa-miR-4666a-3p86.0346NM_001134224
INPP4Ahsa-miR-472983.7368NM_001134225
INPP4Ahsa-miR-455-5p83.4994NM_001134225
INPP4Ahsa-miR-6740-3p83.3587NM_001134224
INPP4Ahsa-miR-548ae-3p83.1747NM_001134225
INPP4Ahsa-miR-548j-3p83.1747NM_001134225
INPP4Ahsa-miR-548aq-3p83.1747NM_001134225
INPP4Ahsa-miR-497-3p82.8961NM_001134225
INPP4Ahsa-miR-6832-3p82.5804NM_001134224
INPP4Ahsa-miR-4697-3p81.4846NM_001134224
INPP4Ahsa-miR-580-3p81.2806NM_001134225
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Motifs and transcription factors (TFs) regulating INPP4A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
INPP4Ametacluster_198.3ZFP64 (directAnnotation).
INPP4Acisbp__M00341PAX6 (directAnnotation).
INPP4Acisbp__M00968MTF2 (directAnnotation).
INPP4Atransfac_pro__M00716ZBTB14 (directAnnotation).
INPP4Atransfac_pro__M04893TAF1 (directAnnotation).
INPP4Atransfac_pro__M04916TAF1 (directAnnotation).
INPP4Atransfac_pro__M02089E2F3 (directAnnotation).
INPP4Atransfac_pro__M04817ZBTB33 (directAnnotation).
INPP4Atransfac_pro__M07310SP5 (directAnnotation).
INPP4Aflyfactorsurvey__Mad_FlyReg_FBgn0011648SMAD9 (inferredBy_Orthology).
INPP4Ahdpi__NRLNRL (directAnnotation).
INPP4Akznf__ZNF548_Imbeault2017_RP_RCADEZNF548 (directAnnotation).
INPP4Ahdpi__HIP2UBE2K (directAnnotation).
INPP4Atransfac_pro__M07387ZBTB7A (directAnnotation).
INPP4Atransfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
INPP4Atransfac_pro__M01783SP2 (directAnnotation).
INPP4Acisbp__M07938E2F1 (directAnnotation).
INPP4Ametacluster_7.13ZFX (directAnnotation).
INPP4Atfdimers__MD00483ZBTB14 (directAnnotation).
INPP4Atransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
INPP4Ahdpi__GTF3C2GTF3C2 (directAnnotation).
INPP4Adbtfbs__ZBTB8A_HEK293_ENCSR481FEC_merged_N1ZBTB8A (directAnnotation).
INPP4Ametacluster_115.1NEUROD1; PHF1; ZBTB20; ZNF17; ZNF296; ZNF350; ZNF486; ZNF574; ZNF589; ZNF891 (directAnnotation). IRF4; IRF6; PRDM5 (inferredBy_Orthology).
INPP4Ataipale_tf_pairs__TFAP2C_HES7_NNCRCGYGNNNNNNSCCNNNGGS_CAP_reprHES7; TFAP2C (directAnnotation).
INPP4Ataipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
INPP4Atransfac_pro__M03806ZBTB7C (directAnnotation).
INPP4Ahdpi__ZNF304ZNF304 (directAnnotation).
INPP4Acisbp__M00788ZFY (inferredBy_Orthology).
INPP4Atransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
INPP4Ametacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
INPP4Atransfac_pro__M00800TFAP2A; TFAP2B; TFAP2C (directAnnotation).
INPP4Acisbp__M00343PAX6 (directAnnotation).
INPP4Atransfac_pro__M12697ZNF142 (directAnnotation).
INPP4Ametacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
INPP4Atransfac_pro__M00938E2F1 (directAnnotation).
INPP4Akznf__ZNF267_Imbeault2017_RP_RCADEZNF267 (directAnnotation).
INPP4Ataipale_cyt_meth__E2F2_NCGCGCGCGCM_eDBD_methE2F2 (directAnnotation).
INPP4Atransfac_pro__M12694ZFP14 (directAnnotation).
INPP4Atransfac_pro__M01253CNOT3 (directAnnotation).
INPP4Atransfac_pro__M04617ZBTB7A (directAnnotation).
INPP4Ametacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
INPP4Ametacluster_24.1HIC1; HIC1; ZNF816; ZNF816; ZNF816; ZXDC (directAnnotation).
INPP4Ametacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."