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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: HOXD1

Summary for HOXD1

Gene informationGene symbol

HOXD1

Ensembl ID

ENSG00000128645

Entrez ID

3231

Gene namehomeobox D1
SynonymsHOX4|HOX4G
Gene typeprotein_coding
UniProtAcc

Q9GZZ0


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Dataset with differentially expressed gene: HOXD1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.3537360.00e+00

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Expression of HOXD1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HOXD1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HOXD1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HOXD1hsa-miR-6715b-5p94.9586NM_024501
HOXD1hsa-miR-426994.9586NM_024501
HOXD1hsa-miR-670-5p93.0323NM_024501
HOXD1hsa-miR-4666a-5p91.1234NM_024501
HOXD1hsa-miR-7114-5p90.6359NM_024501
HOXD1hsa-miR-426290.1679NM_024501
HOXD1hsa-miR-556-3p89.7612NM_024501
HOXD1hsa-miR-431688.5943NM_024501
HOXD1hsa-miR-504-3p88.4167NM_024501
HOXD1hsa-miR-429588.3478NM_024501
HOXD1hsa-miR-301b-3p88.3478NM_024501
HOXD1hsa-miR-301a-3p88.3478NM_024501
HOXD1hsa-miR-130a-3p88.3478NM_024501
HOXD1hsa-miR-130b-3p88.3478NM_024501
HOXD1hsa-miR-366688.3478NM_024501
HOXD1hsa-miR-454-3p88.3478NM_024501
HOXD1hsa-miR-181b-5p87.9073NM_024501
HOXD1hsa-miR-181d-5p87.9073NM_024501
HOXD1hsa-miR-181a-5p87.9073NM_024501
HOXD1hsa-miR-181c-5p87.9073NM_024501
HOXD1hsa-miR-5582-5p86.6349NM_024501
HOXD1hsa-miR-450086.3646NM_024501
HOXD1hsa-miR-64686.0079NM_024501
HOXD1hsa-miR-4755-5p83.6837NM_024501
HOXD1hsa-miR-5006-3p83.6837NM_024501
HOXD1hsa-miR-98-5p81.9231NM_024501
HOXD1hsa-let-7g-5p81.9231NM_024501
HOXD1hsa-let-7b-5p81.9231NM_024501
HOXD1hsa-let-7i-5p81.9231NM_024501
HOXD1hsa-let-7e-5p81.9231NM_024501
HOXD1hsa-miR-445881.9231NM_024501
HOXD1hsa-let-7c-5p81.9231NM_024501
HOXD1hsa-let-7d-5p81.9231NM_024501
HOXD1hsa-let-7a-5p81.9231NM_024501
HOXD1hsa-let-7f-5p81.9231NM_024501
HOXD1hsa-miR-118381.1284NM_024501
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Motifs and transcription factors (TFs) regulating HOXD1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HOXD1metacluster_126.3LIN28B; LIN28B (directAnnotation).
HOXD1cisbp__M07938E2F1 (directAnnotation).
HOXD1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."