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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HNF4A

Summary for HNF4A

Gene informationGene symbol

HNF4A

Ensembl ID

ENSG00000101076

Entrez ID

3172

Gene namehepatocyte nuclear factor 4 alpha
SynonymsHNF4|MODY|MODY1|NR2A1|TCF14
Gene typeprotein_coding
UniProtAcc

P41235


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Dataset with differentially expressed gene: HNF4A

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.6839520.00e+00

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Expression of HNF4A in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HNF4A

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HNF4A

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HNF4Ahsa-miR-92a-2-5p97.3944NM_001030003
HNF4Ahsa-miR-806395.7289NM_001287184
HNF4Ahsa-miR-3059-3p93.8935NM_000457
HNF4Ahsa-miR-34a-5p93.4584NM_000457
HNF4Ahsa-miR-449a93.4584NM_000457
HNF4Ahsa-miR-473993.4532NM_000457
HNF4Ahsa-miR-4756-5p93.4532NM_000457
HNF4Ahsa-miR-132193.4532NM_000457
HNF4Ahsa-miR-76592.2637NM_001030003
HNF4Ahsa-miR-449b-5p92.0855NM_000457
HNF4Ahsa-miR-34c-5p92.0855NM_000457
HNF4Ahsa-miR-431691.7954NM_001287184
HNF4Ahsa-miR-4787-3p89.4476NM_001030003
HNF4Ahsa-miR-548at-5p88.2329NM_001030003
HNF4Ahsa-miR-397288.1978NM_001287184
HNF4Ahsa-miR-120288.1978NM_001287184
HNF4Ahsa-miR-11181-3p86.4957NM_001030003
HNF4Ahsa-miR-797785.1048NM_001030003
HNF4Ahsa-miR-629-5p84.9612NM_001030003
HNF4Ahsa-miR-569384.5007NM_001030003
HNF4Ahsa-miR-6846-5p83.7467NM_001030003
HNF4Ahsa-miR-6839-3p82.4899NM_001030003
HNF4Ahsa-miR-7106-5p82.1671NM_000457
HNF4Ahsa-miR-451681.1877NM_001030003
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Motifs and transcription factors (TFs) regulating HNF4A

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HNF4A"AVI-4557"

DB05447

small molecule
HNF4A"Lauric acid"

DB03017

small molecule
HNF4A"Myristic acid"

DB08231

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."