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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HMGCR

Summary for HMGCR

Gene informationGene symbol

HMGCR

Ensembl ID

ENSG00000113161

Entrez ID

3156

Gene name3-hydroxy-3-methylglutaryl-CoA reductase
SynonymsNA
Gene typeprotein_coding
UniProtAcc

P04035


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Dataset with differentially expressed gene: HMGCR

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3172881.21e-29

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Expression of HMGCR in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HMGCR

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.
Gene symbolMechanism

HMGCR

Unusual Activation of Pro-survival Pathway
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MicroRNAs (miRNA) regulating HMGCR

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HMGCRhsa-miR-4666a-3p97.0682NM_000859
HMGCRhsa-let-7c-3p95.4099NM_000859
HMGCRhsa-let-7b-3p95.089NM_000859
HMGCRhsa-miR-98-3p95.089NM_000859
HMGCRhsa-let-7a-3p95.089NM_000859
HMGCRhsa-let-7f-1-3p95.089NM_000859
HMGCRhsa-miR-130594.8673NM_000859
HMGCRhsa-miR-998592.6941NM_000859
HMGCRhsa-miR-27a-3p92.6941NM_000859
HMGCRhsa-miR-27b-3p92.6941NM_000859
HMGCRhsa-miR-513a-5p92.6941NM_000859
HMGCRhsa-miR-146a-3p92.2473NM_000859
HMGCRhsa-miR-454091.8557NM_000859
HMGCRhsa-miR-493-5p91.6854NM_000859
HMGCRhsa-miR-6859-3p91.2613NM_000859
HMGCRhsa-miR-6875-3p90.2953NM_000859
HMGCRhsa-miR-7844-5p90.2805NM_000859
HMGCRhsa-miR-664a-5p89.995NM_000859
HMGCRhsa-miR-479489.995NM_000859
HMGCRhsa-miR-569089.5128NM_000859
HMGCRhsa-miR-450389.4429NM_000859
HMGCRhsa-miR-4704-3p88.4681NM_000859
HMGCRhsa-miR-20b-3p87.2748NM_000859
HMGCRhsa-miR-132386.7144NM_000859
HMGCRhsa-miR-653-3p86.4331NM_000859
HMGCRhsa-miR-62386.1184NM_000859
HMGCRhsa-miR-450a-1-3p86.0452NM_000859
HMGCRhsa-miR-369085.3055NM_000859
HMGCRhsa-miR-374c-5p84.4072NM_000859
HMGCRhsa-miR-655-3p84.4072NM_000859
HMGCRhsa-miR-3065-3p83.5182NM_000859
HMGCRhsa-miR-4778-5p82.7095NM_000859
HMGCRhsa-miR-313382.211NM_000859
HMGCRhsa-miR-548o-3p81.163NM_000859
HMGCRhsa-miR-6515-3p81.0351NM_000859
HMGCRhsa-miR-76080.4719NM_000859
HMGCRhsa-miR-806380.2095NM_000859
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Motifs and transcription factors (TFs) regulating HMGCR

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HMGCRmetacluster_135.11NR2C2 (directAnnotation).
HMGCRmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
HMGCRmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
HMGCRmetacluster_7.13ZFX (directAnnotation).
HMGCRkznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
HMGCRcisbp__M00968MTF2 (directAnnotation).
HMGCRmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
HMGCRmetacluster_160.20JUND; PRDM15 (directAnnotation).
HMGCRmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
HMGCRmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
HMGCRjaspar__MA0185.1DEAF1 (inferredBy_Orthology).
HMGCRmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
HMGCRcisbp__M00788ZFY (inferredBy_Orthology).
HMGCRkznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
HMGCRmetacluster_175.1ZNF283 (directAnnotation).
HMGCRhdpi__ZNF304ZNF304 (directAnnotation).
HMGCRtransfac_pro__M02844BCL6B (inferredBy_Orthology).
HMGCRmetacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
HMGCRtransfac_pro__M01199TRIM28 (directAnnotation).
HMGCRkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
HMGCRmetacluster_151.2ZNF23 (directAnnotation).
HMGCRtransfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
HMGCRtransfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
HMGCRtransfac_pro__M03806ZBTB7C (directAnnotation).
HMGCRtransfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HMGCR"(S)-Hmg-Coa"

DB03169

small molecule
HMGCR"1,4-Dithiothreitol"

DB04447

small molecule
HMGCR"Atorvastatin"

DB01076

small molecule
HMGCR"Cannabidiol"

DB09061

small molecule
HMGCR"Cerivastatin"

DB00439

small molecule
HMGCR"Coenzyme A"

DB01992

small molecule
HMGCR"Fluvastatin"

DB01095

small molecule
HMGCR"Lovastatin"

DB00227

small molecule
HMGCR"Medical Cannabis"

DB14009

biotech
HMGCR"Meglutol"

DB04377

small molecule
HMGCR"Mevastatin"

DB06693

small molecule
HMGCR"Nabiximols"

DB14011

small molecule
HMGCR"NADH"

DB00157

small molecule
HMGCR"Nicotinamide adenine dinucleotide phosphate"

DB03461

small molecule
HMGCR"Pitavastatin"

DB08860

small molecule
HMGCR"Pravastatin"

DB00175

small molecule
HMGCR"Rosuvastatin"

DB01098

small molecule
HMGCR"Simvastatin"

DB00641

small molecule
HMGCR"TAK-475"

DB05317

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."