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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HBB

Summary for HBB

Gene informationGene symbol

HBB

Ensembl ID

ENSG00000244734

Entrez ID

3043

Gene namehemoglobin subunit beta
Synonymsbeta-globin|CD113t-C
Gene typeprotein_coding
UniProtAcc

P68871


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Dataset with differentially expressed gene: HBB

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostMono/Macro-0.7147230.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostNK cells-0.4752256.62e-07

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpostCD4+ T cells0.3001570.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreB cells3.153090.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreNK cells3.252130.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreMono/Macro3.479510.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD8+ T cells3.137280.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprePlasma cells1.933834.02e-25

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprecDCs2.895930.00e+00

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelprepDCs3.343951.11e-36

GSE169246_PacBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)ChemotherapypaclitaxelpreCD4+ T cells3.033790.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostpDCs-3.506839.34e-14

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostCD8+ T cells-1.040740.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostNK cells-1.09160.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostMono/Macro-1.030840.00e+00

GSE169246_PacAteBlood

patientsPeripheral blood mononuclear cellsBreast cancerAdvanced triple-negative breast cancer (TNBC)Immunotherapyatezolizumab + paclitaxelpostcDCs-0.726556.74e-29

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)preNK cells-2.939160.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD4+ T cells1.114971.58e-10

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAMono/Macro1.587440.00e+00

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNANK cells1.125241.17e-05

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNACD8+ T cells0.5125912.34e-09

GSE164551

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)ImmunotherapyCAR-TNAErythrocytes0.5436142.83e-39

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preNK cells-1.033210.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD8+ T cells-0.9058520.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preCD4+ T cells-0.4854520.00e+00

GSE197268_Tisa-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapytisa-cel (CAR-T)preMono/Macro-2.149370.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreB cells-0.9071521.33e-09

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMono/Macro-0.4946710.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisoloneprecDCs-1.328998.10e-06

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.4016320.00e+00

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreErythrocytes0.5193393.96e-41

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostB cells4.389462.73e-09

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD4+ T cells1.376280.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostCD8+ T cells0.4708210.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells-1.844480.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostNK cells1.523010.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreNK cells1.591860.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreB cells1.276049.12e-06

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD4+ T cells1.463080.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreMalignant cells0.71850.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpreCD8+ T cells1.216130.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostNK cells1.180038.49e-37

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepostCD8+ T cells0.744960.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreMono/Macro0.6040870.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreCD4+ T cells0.557292.11e-12

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasonepreCD8+ T cells0.530040.00e+00

GSE161801_IMiD

patientsBone marrow aspirateMultiple myelomaRefractory multiple myeloma (MM)Targeted therapypomalidomide + dexamethasone OR lenalidomide + dexamethasoneprecDCs0.6768463.53e-07

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Expression of HBB in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HBB

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HBB

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HBBhsa-miR-361-3p92.9216NM_000518
HBBhsa-miR-6750-5p91.6395NM_000518
HBBhsa-miR-6822-5p91.6395NM_000518
HBBhsa-miR-4520-3p80.2192NM_000518
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Motifs and transcription factors (TFs) regulating HBB

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HBBtaipale_tf_pairs__MEIS1_SOX2_TGACAKNNNAACAATGN_CAP_reprMEIS1; SOX2 (directAnnotation).
HBBtransfac_pro__M06141ZNF708 (directAnnotation).
HBBtransfac_pro__M04855IRF4 (directAnnotation).
HBBtaipale_tf_pairs__TEAD4_DLX2_NRCATTCNNNNYAATTN_CAP_reprDLX2; TEAD4 (directAnnotation).
HBBtfdimers__MD00425ELF5; SMAD4 (directAnnotation).
HBBtaipale_tf_pairs__SOX17_ACCGAACAAT_HTSOX17 (directAnnotation).
HBBtaipale_tf_pairs__ERF_MAX_RSCGGAANCACGTGN_CAP_reprERF; MAX (directAnnotation).
HBBmetacluster_155.6ZNF212; ZNF785; ZSCAN4 (directAnnotation).
HBBtaipale_cyt_meth__FOXO3_NTCCCCACACN_eDBDFOXO3 (directAnnotation).
HBBhomer__DGCACACGTG_MNTMNT (directAnnotation).
HBBmetacluster_8.2CBFB; CBFB; CBFB; CBFB; CBFB; RUNX1; RUNX1; RUNX1; RUNX1; RUNX1; RUNX2; RUNX2; RUNX2; RUNX3; RUNX3; ZNF558; ZNF558 (directAnnotation). BCL11B; RUNX1; RUNX2 (inferredBy_Orthology).
HBBkznf__ZNF605_Imbeault2017_OM_RCADEZNF605 (directAnnotation).
HBBtransfac_pro__M04887TCF12 (directAnnotation).
HBBtransfac_pro__M05397ZNF444 (directAnnotation).
HBBmetacluster_85.8ZSCAN4 (directAnnotation).
HBBtfdimers__MD00581ATF5; NKX3-2 (directAnnotation).
HBBtransfac_pro__M06717ZKSCAN7 (directAnnotation).
HBBtransfac_pro__M05815ZNF613 (directAnnotation).
HBBtransfac_pro__M06055ZNF99 (directAnnotation).
HBBtaipale_tf_pairs__FLI1_MAX_RSCGGAANCACGTGN_CAPFLI1; MAX (directAnnotation).
HBBswissregulon__hs__SPI1SPI1 (directAnnotation).
HBBtransfac_pro__M06075ZNF197 (directAnnotation).
HBBswissregulon__mm__Irf4IRF4 (inferredBy_Orthology).
HBBtransfac_pro__M05803ZNF584 (directAnnotation).
HBBtransfac_pro__M02031SPI1 (directAnnotation).
HBBtransfac_pro__M01660GABPA (directAnnotation).
HBBmetacluster_179.1ZNF410; ZNF410 (directAnnotation).
HBBtaipale_tf_pairs__ETV2_EOMES_RCCGGANNNNNNNNNNNACACCTN_CAP_reprEOMES; ETV2 (directAnnotation).
HBBmetacluster_10.39NPAS2 (inferredBy_Orthology).
HBBcisbp__M01802XBP1 (inferredBy_Orthology).
HBBtransfac_pro__M01266ELF1 (directAnnotation).
HBBtransfac_pro__M06342ZNF329 (inferredBy_Orthology).
HBBmetacluster_27.6ZNF410; ZNF410 (directAnnotation).
HBBjaspar__MA1508.1IKZF1 (directAnnotation).
HBBtransfac_pro__M06029ZNF197 (directAnnotation).
HBBtransfac_pro__M05477ZNF639 (directAnnotation).
HBBtransfac_pro__M06295ZNF667 (inferredBy_Orthology).
HBBtaipale_tf_pairs__ETV2_TBX21_RCCGGANNNNNNNNNNNACACCTN_CAPETV2; TBX21 (directAnnotation).
HBBtfdimers__MD00204GABPA; NKX2-1 (directAnnotation).
HBBtfdimers__MD00593GABPA; PITX3 (directAnnotation).
HBBtransfac_pro__M06741ZNF70 (directAnnotation).
HBBtransfac_pro__M06148ZNF41 (directAnnotation).
HBBtaipale_tf_pairs__FOXO1_SPDEF_WMSCGGATGTKNW_CAP_reprFOXO1; SPDEF (directAnnotation).
HBBswissregulon__mm__Pbx1PBX1 (inferredBy_Orthology).
HBBtransfac_pro__M05464SALL1 (directAnnotation).
HBBmetacluster_97.2GTF3A (inferredBy_Orthology).
HBBtransfac_pro__M06500ZNF614 (directAnnotation).
HBBmetacluster_183.3EHF; ELF3; FLI1; SPIB (directAnnotation). EHF; EHF; ELF2; ELF3; ELF4; ELF5; ERG; ERG; ETV3; ETV6; FLI1; SPI1; SPI1 (inferredBy_Orthology).
HBBtransfac_pro__M06622ZNF681 (directAnnotation).
HBBtransfac_pro__M05856ZNF565 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HBB"2,6-dicarboxynaphthalene"

DB08262

small molecule
HBB"2-[(2-methoxy-5-methylphenoxy)methyl]pyridine"

DB07427

small molecule
HBB"2-[4-({[(3,5-DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]-2-METHYLPROPANOIC ACID"

DB08077

small molecule
HBB"4-Carboxycinnamic Acid"

DB02126

small molecule
HBB"4-[(5-methoxy-2-methylphenoxy)methyl]pyridine"

DB07428

small molecule
HBB"Copper"

DB09130

small molecule
HBB"Efaproxiral"

DB08486

small molecule
HBB"Ferric pyrophosphate citrate"

DB13995

small molecule
HBB"Ferric pyrophosphate"

DB09147

small molecule
HBB"Iron Dextran"

DB00893

small molecule
HBB"Nitrous acid"

DB09112

small molecule
HBB"Pentaerythritol tetranitrate"

DB06154

small molecule
HBB"Sebacic acid"

DB07645

small molecule
HBB"Sodium ferric gluconate complex"

DB09517

small molecule
HBB"Trimesic acid"

DB08632

small molecule
HBB"Zinc acetate"

DB14487

small molecule
HBB"Zinc chloride"

DB14533

small molecule
HBB"Zinc sulfate, unspecified form"

DB14548

small molecule
HBB"Zinc"

DB01593

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."