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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target

Gene: HAPLN1

Summary for HAPLN1

Gene informationGene symbol

HAPLN1

Ensembl ID

ENSG00000145681

Entrez ID

1404

Gene namehyaluronan and proteoglycan link protein 1
SynonymsCRTL1
Gene typeprotein_coding
UniProtAcc

P10915


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Dataset with differentially expressed gene: HAPLN1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE138267

CDXTumor tissueLung cancerSmall cell lung cancer (SCLC)ChemotherapyNANAMalignant cells0.9783170.00e+00

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Expression of HAPLN1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HAPLN1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HAPLN1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HAPLN1hsa-miR-314899.2551NM_001884
HAPLN1hsa-miR-1277-5p98.9044NM_001884
HAPLN1hsa-miR-199a-5p97.7802NM_001884
HAPLN1hsa-miR-199b-5p97.7802NM_001884
HAPLN1hsa-miR-5692c97.5931NM_001884
HAPLN1hsa-miR-5692b97.5931NM_001884
HAPLN1hsa-miR-63697.4353NM_001884
HAPLN1hsa-miR-449596.9742NM_001884
HAPLN1hsa-let-7c-3p95.9966NM_001884
HAPLN1hsa-miR-477595.4786NM_001884
HAPLN1hsa-miR-888-5p94.9113NM_001884
HAPLN1hsa-miR-6740-5p94.7402NM_001884
HAPLN1hsa-miR-6730-5p94.2976NM_001884
HAPLN1hsa-miR-60794.0182NM_001884
HAPLN1hsa-miR-427993.8506NM_001884
HAPLN1hsa-miR-6893-5p93.8355NM_001884
HAPLN1hsa-miR-94093.8355NM_001884
HAPLN1hsa-miR-6808-5p93.8355NM_001884
HAPLN1hsa-miR-218-5p93.4946NM_001884
HAPLN1hsa-miR-314393.1788NM_001884
HAPLN1hsa-miR-60093.0992NM_001884
HAPLN1hsa-miR-9983-3p92.9914NM_001884
HAPLN1hsa-miR-374a-5p92.7591NM_001884
HAPLN1hsa-miR-4743-3p92.5908NM_001884
HAPLN1hsa-miR-797692.4973NM_001884
HAPLN1hsa-miR-27b-3p92.3625NM_001884
HAPLN1hsa-miR-27a-3p92.3625NM_001884
HAPLN1hsa-miR-998592.3625NM_001884
HAPLN1hsa-miR-431991.4056NM_001884
HAPLN1hsa-miR-5006-3p91.3034NM_001884
HAPLN1hsa-miR-5001-3p91.1108NM_001884
HAPLN1hsa-miR-2116-5p90.7592NM_001884
HAPLN1hsa-miR-374b-5p90.5363NM_001884
HAPLN1hsa-miR-129-5p90.4791NM_001884
HAPLN1hsa-miR-6728-5p90.2556NM_001884
HAPLN1hsa-miR-89090.0239NM_001884
HAPLN1hsa-miR-7154-5p89.4238NM_001884
HAPLN1hsa-miR-397789.4183NM_001884
HAPLN1hsa-miR-548at-5p89.3978NM_001884
HAPLN1hsa-miR-211-5p89.2273NM_001884
HAPLN1hsa-miR-204-5p89.2273NM_001884
HAPLN1hsa-miR-125b-5p89.1169NM_001884
HAPLN1hsa-miR-125a-5p89.1169NM_001884
HAPLN1hsa-miR-9-3p88.8214NM_001884
HAPLN1hsa-miR-548ar-3p88.784NM_001884
HAPLN1hsa-miR-211388.5435NM_001884
HAPLN1hsa-miR-4755-5p88.4285NM_001884
HAPLN1hsa-miR-5089-5p88.3686NM_001884
HAPLN1hsa-miR-340-5p87.6991NM_001884
HAPLN1hsa-miR-442787.6341NM_001884
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Motifs and transcription factors (TFs) regulating HAPLN1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HAPLN1taipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
HAPLN1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
HAPLN1transfac_pro__M07397ZNF148 (directAnnotation).
HAPLN1metacluster_131.7EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; EGR3; EGR3; EGR3; EGR3; EGR4; EGR4; WT1 (directAnnotation). EGR1; EGR1; EGR1; EGR1; EGR1; EGR2; EGR2; EGR2; EGR2; EGR2; EGR3; EGR3; WT1; ZBTB43; ZBTB43; ZBTB43; ZBTB43; ZBTB5; ZBTB5; ZBTB5; ZBTB5; ZBTB7A; ZBTB7A; ZBTB7A; ZBTB7A; ZNF367; ZNF367; ZNF367; ZNF367; ZNF740; ZNF740; ZNF740; ZNF740 (inferredBy_Orthology).
HAPLN1metacluster_131.4EGR2; EGR2; ZFHX2; ZNF141 (directAnnotation).
HAPLN1taipale_cyt_meth__ZNF281_NCCCCTCCCCCN_eDBD_methZNF281 (directAnnotation).
HAPLN1metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
HAPLN1metacluster_7.13ZFX (directAnnotation).
HAPLN1metacluster_3.11SP1; SP1; SP2; SP3; SP3; SP4 (directAnnotation).
HAPLN1homer__GGGGGGGG_MazMAZ (directAnnotation).
HAPLN1transfac_pro__M01175ZBTB7B (directAnnotation).
HAPLN1taipale_cyt_meth__ZNF460_NRMCGCCCCCCGN_eDBD_methZNF460 (directAnnotation).
HAPLN1tfdimers__MD00151CHURC1 (directAnnotation).
HAPLN1metacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
HAPLN1metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
HAPLN1transfac_pro__M01303SP1 (directAnnotation).
HAPLN1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
HAPLN1swissregulon__hs__CHD1CHD1 (directAnnotation).
HAPLN1transfac_pro__M02090E2F4 (directAnnotation).
HAPLN1transfac_pro__M01714KLF15 (directAnnotation).
HAPLN1metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
HAPLN1jaspar__MA1122.1TFDP1 (directAnnotation).
HAPLN1hocomoco__PROX1_HUMAN.H11MO.0.DPROX1 (directAnnotation).
HAPLN1transfac_pro__M02089E2F3 (directAnnotation).
HAPLN1transfac_pro__M12604ZNF444 (directAnnotation).
HAPLN1metacluster_3.14WT1; WT1 (directAnnotation).
HAPLN1metacluster_3.4SP1; SP2; SP2; SP3 (directAnnotation).
HAPLN1metacluster_126.3LIN28B; LIN28B (directAnnotation).
HAPLN1hocomoco__EGR4_HUMAN.H11MO.0.DEGR4 (directAnnotation).
HAPLN1metacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
HAPLN1cisbp__M07938E2F1 (directAnnotation).
HAPLN1kznf__ZNF202_Imbeault2017_OM_MEMEZNF202 (directAnnotation).
HAPLN1homer__GGCGGGAARN_E2F6E2F6 (directAnnotation).
HAPLN1transfac_pro__M07436WT1 (directAnnotation).
HAPLN1transfac_pro__M02281SP1 (directAnnotation).
HAPLN1taipale_tf_pairs__GCM1_ELF1_GTGCGGGCGGAAGTN_CAP_reprELF1; GCM1 (directAnnotation).
HAPLN1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
HAPLN1metacluster_3.3KLF10; KLF15; KLF16; KLF9; SP1 (directAnnotation).
HAPLN1transfac_pro__M02898SMAD3 (directAnnotation).
HAPLN1transfac_public__M00491PATZ1 (directAnnotation).
HAPLN1transfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
HAPLN1metacluster_135.8ZNF516; ZNF536 (inferredBy_Orthology).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.
Target nameDrug nameDrug IDDrug type
HAPLN1"Hyaluronic acid"

DB08818

small molecule
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1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."