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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: HACD3

Summary for HACD3

Gene informationGene symbol

HACD3

Ensembl ID

ENSG00000074696

Entrez ID

51495

Gene name3-hydroxyacyl-CoA dehydratase 3
SynonymsB-ind1|HSPC121|PTPLAD1
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: HACD3

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells-0.5888792.57e-02

GSE153697

patientsBone marrow aspirateAcute lymphoblastic leukemiaRelapsed B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyanti-CD19 CAR-TNAMalignant cells0.3470591.90e-21

GSE189460

patientsBone marrow aspirateMultiple myelomaMultiple myeloma (MM)Targeted therapybortezomib + melphalan + prednisolonepreMalignant cells0.2663940.00e+00

GSE199333

patientsBone marrow aspirateAcute myeloid leukemiaPrimary FLT3-ITD-mutated acute myeloid leukemia (AML)Targeted therapygilteritinibpostMalignant cells0.2569970.00e+00

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3388583.27e-24

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Expression of HACD3 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to HACD3

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating HACD3

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
HACD3hsa-miR-6867-5p99.9836NM_016395
HACD3hsa-miR-20699.6941NM_016395
HACD3hsa-miR-1-3p99.6299NM_016395
HACD3hsa-miR-61399.5551NM_016395
HACD3hsa-miR-430799.1132NM_016395
HACD3hsa-miR-480198.383NM_016395
HACD3hsa-miR-4731-3p97.6656NM_016395
HACD3hsa-miR-6507-5p96.4899NM_016395
HACD3hsa-miR-216a-5p95.5419NM_016395
HACD3hsa-miR-132494.213NM_016395
HACD3hsa-miR-135b-3p93.8813NM_016395
HACD3hsa-miR-891a-5p93.24NM_016395
HACD3hsa-miR-570493.2044NM_016395
HACD3hsa-miR-33a-3p91.3755NM_016395
HACD3hsa-miR-135a-2-3p90.5964NM_016395
HACD3hsa-miR-4722-5p89.6914NM_016395
HACD3hsa-miR-508-3p88.8314NM_016395
HACD3hsa-miR-509-5p88.8205NM_016395
HACD3hsa-miR-509-3-5p88.8205NM_016395
HACD3hsa-miR-89088.5368NM_016395
HACD3hsa-miR-125b-2-3p88.243NM_016395
HACD3hsa-miR-548az-3p87.9608NM_016395
HACD3hsa-miR-441887.8355NM_016395
HACD3hsa-miR-299-5p87.2959NM_016395
HACD3hsa-miR-548ar-3p86.5605NM_016395
HACD3hsa-miR-4700-5p86.2875NM_016395
HACD3hsa-miR-808986.2875NM_016395
HACD3hsa-miR-4667-5p86.2875NM_016395
HACD3hsa-miR-302c-5p85.4928NM_016395
HACD3hsa-miR-314384.5687NM_016395
HACD3hsa-miR-6835-3p84.5375NM_016395
HACD3hsa-miR-63583.8195NM_016395
HACD3hsa-miR-568083.0452NM_016395
HACD3hsa-miR-548e-3p82.8651NM_016395
HACD3hsa-miR-548a-3p82.8651NM_016395
HACD3hsa-miR-548f-3p82.8651NM_016395
HACD3hsa-miR-548bc82.8651NM_016395
HACD3hsa-miR-443782.8453NM_016395
HACD3hsa-miR-3120-3p82.2881NM_016395
HACD3hsa-miR-4799-5p81.4415NM_016395
HACD3hsa-miR-10526-3p80.6998NM_016395
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Motifs and transcription factors (TFs) regulating HACD3

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
HACD3transfac_public__M00024E2F1 (directAnnotation).
HACD3metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
HACD3transfac_pro__M04950EGR1 (directAnnotation).
HACD3transfac_pro__M01182HINFP (directAnnotation).
HACD3transfac_pro__M00652NRF1 (directAnnotation).
HACD3metacluster_144.3ZNF704; ZNF704 (directAnnotation).
HACD3metacluster_7.13ZFX (directAnnotation).
HACD3kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
HACD3cisbp__M00968MTF2 (directAnnotation).
HACD3metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
HACD3jaspar__MA0185.1DEAF1 (inferredBy_Orthology).
HACD3cisbp__M00788ZFY (inferredBy_Orthology).
HACD3hdpi__ZNF304ZNF304 (directAnnotation).
HACD3transfac_pro__M01199TRIM28 (directAnnotation).
HACD3transfac_pro__M03806ZBTB7C (directAnnotation).
HACD3transfac_pro__M00803E2F1; E2F3; E2F4; TFDP1 (directAnnotation).
HACD3metacluster_197.3E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F1; E2F2; E2F2; E2F2; E2F2; E2F2; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F3; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F4; E2F5; E2F5; E2F5; E2F5; E2F6; E2F7; E2F7; E2F7; RB1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP1; TFDP2; TFDP2 (directAnnotation).
HACD3metacluster_15.3E2F1; E2F6; E2F8; E2F8; TFDP1 (directAnnotation). E2F3 (inferredBy_Orthology).
HACD3transfac_pro__M01090SMAD9 (inferredBy_Orthology).
HACD3jaspar__MA0748.2YY2 (directAnnotation).
HACD3kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
HACD3metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
HACD3jaspar__MA1122.1TFDP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."