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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene (This gene does not contain this module)

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: H3-3B

Summary for H3-3B

Gene informationGene symbol

H3-3B

Ensembl ID

ENSG00000132475

Entrez ID

3021

Gene nameH3.3 histone B
SynonymsH3.3B|H3F3B
Gene typeprotein_coding
UniProtAcc

P84243


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Dataset with differentially expressed gene: H3-3B

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE197268_Axi-cel

patientsPeripheral blood mononuclear cellsAcute lymphoblastic leukemiaLarge B-cell acute lymphoblastic leukemia (B-ALL)Immunotherapyaxi-cel (CAR-T)postProgenitors0.5960221.52e-03

GSE164897_Vem

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenibNAMalignant cells0.3507030.00e+00

GSE164897_VemCob

A375 cell lineCell lineMelanomaBRAFV600E-mutant melanomaTargeted therapyvemurafenib + combimetinibNAMalignant cells-0.7765470.00e+00

GSE164897_VemTra

A375 cell lineCell lineMelanomaB+E2:E57RAFV600E-mutant melanomaTargeted therapyvemurafenib + trametinibNAMalignant cells-1.454850.00e+00

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Expression of H3-3B in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to H3-3B

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating H3-3B

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
H3-3Bhsa-miR-128-3p95.1904NM_005324
H3-3Bhsa-miR-216a-3p95.1904NM_005324
H3-3Bhsa-miR-4793-5p94.7787NM_005324
H3-3Bhsa-miR-338-5p94.4663NM_005324
H3-3Bhsa-miR-22-3p94.3187NM_005324
H3-3Bhsa-miR-3681-3p94.0253NM_005324
H3-3Bhsa-miR-4536-5p91.2187NM_005324
H3-3Bhsa-miR-340-5p90.6491NM_005324
H3-3Bhsa-miR-93888.1324NM_005324
H3-3Bhsa-miR-361-3p87.9514NM_005324
H3-3Bhsa-miR-316386.9559NM_005324
H3-3Bhsa-miR-129-2-3p86.9523NM_005324
H3-3Bhsa-miR-129-1-3p86.9523NM_005324
H3-3Bhsa-miR-224-5p86.5738NM_005324
H3-3Bhsa-miR-471986.0748NM_005324
H3-3Bhsa-miR-1233-3p84.9171NM_005324
H3-3Bhsa-miR-449683.6468NM_005324
H3-3Bhsa-miR-125783.6392NM_005324
H3-3Bhsa-miR-63081.904NM_005324
H3-3Bhsa-miR-138-5p80.7863NM_005324
H3-3Bhsa-miR-668-3p80.5882NM_005324
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Motifs and transcription factors (TFs) regulating H3-3B

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)

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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."