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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GTF3C4

Summary for GTF3C4

Gene informationGene symbol

GTF3C4

Ensembl ID

ENSG00000125484

Entrez ID

9329

Gene namegeneral transcription factor IIIC subunit 4
SynonymsKAT12|TFIIIC90
Gene typeprotein_coding
UniProtAcc

NA


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Dataset with differentially expressed gene: GTF3C4

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.281026.39e-16

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Expression of GTF3C4 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GTF3C4

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GTF3C4

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GTF3C4hsa-miR-548ap-3p98.1666NM_012204
GTF3C4hsa-miR-548t-3p98.1666NM_012204
GTF3C4hsa-miR-548aa98.1666NM_012204
GTF3C4hsa-miR-129996.5532NM_012204
GTF3C4hsa-miR-430696.0262NM_012204
GTF3C4hsa-miR-518c-5p95.7616NM_012204
GTF3C4hsa-miR-4652-3p95.0312NM_012204
GTF3C4hsa-miR-432693.9795NM_012204
GTF3C4hsa-miR-6889-3p92.7314NM_012204
GTF3C4hsa-miR-570-3p92.6897NM_012204
GTF3C4hsa-miR-7151-3p92.5963NM_012204
GTF3C4hsa-miR-6529-3p92.1083NM_012204
GTF3C4hsa-miR-464490.0836NM_012204
GTF3C4hsa-miR-185-5p90.0836NM_012204
GTF3C4hsa-miR-514b-3p89.5794NM_012204
GTF3C4hsa-miR-514a-3p89.5794NM_012204
GTF3C4hsa-miR-642b-3p88.5807NM_012204
GTF3C4hsa-miR-642a-3p88.5807NM_012204
GTF3C4hsa-miR-452888.5451NM_012204
GTF3C4hsa-miR-4666a-3p87.9317NM_012204
GTF3C4hsa-miR-182787.8868NM_012204
GTF3C4hsa-miR-612487.8639NM_012204
GTF3C4hsa-miR-664a-3p87.5666NM_012204
GTF3C4hsa-miR-6885-3p87.442NM_012204
GTF3C4hsa-miR-517-5p87.3188NM_012204
GTF3C4hsa-miR-1285-5p86.7902NM_012204
GTF3C4hsa-miR-3678-3p86.0478NM_012204
GTF3C4hsa-miR-3613-3p85.6487NM_012204
GTF3C4hsa-miR-548aj-3p85.1426NM_012204
GTF3C4hsa-miR-548x-3p85.1426NM_012204
GTF3C4hsa-let-7e-3p85.0379NM_012204
GTF3C4hsa-miR-5197-5p84.8297NM_012204
GTF3C4hsa-miR-373-5p84.3782NM_012204
GTF3C4hsa-miR-371b-5p84.3782NM_012204
GTF3C4hsa-miR-616-5p84.3782NM_012204
GTF3C4hsa-miR-548d-3p84.2227NM_012204
GTF3C4hsa-miR-6715a-3p83.8349NM_012204
GTF3C4hsa-miR-548aq-3p83.2135NM_012204
GTF3C4hsa-miR-548ae-3p83.2135NM_012204
GTF3C4hsa-miR-548j-3p83.2135NM_012204
GTF3C4hsa-miR-42982.4449NM_012204
GTF3C4hsa-miR-200b-3p82.4449NM_012204
GTF3C4hsa-miR-200c-3p82.4449NM_012204
GTF3C4hsa-miR-426181.7816NM_012204
GTF3C4hsa-miR-548am-3p81.5634NM_012204
GTF3C4hsa-miR-548ah-3p81.5634NM_012204
GTF3C4hsa-miR-548z81.3137NM_012204
GTF3C4hsa-miR-548ac81.3137NM_012204
GTF3C4hsa-miR-548h-3p81.3137NM_012204
GTF3C4hsa-miR-6824-3p81.3072NM_012204
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Motifs and transcription factors (TFs) regulating GTF3C4

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GTF3C4metacluster_61.1DEAF1; DEAF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."