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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GTF2H2

Summary for GTF2H2

Gene informationGene symbol

GTF2H2

Ensembl ID

ENSG00000276910

Entrez ID

2966

Gene namegeneral transcription factor IIH subunit 2
SynonymsBTF2|BTF2P44|p44|T-BTF2P44|TFIIH
Gene typeprotein_coding
UniProtAcc

Q13888


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Dataset with differentially expressed gene: GTF2H2

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE131984_Pac

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)ChemotherapypaclitaxelNAMalignant cells0.26652.53e-09

GSE168668

LNCaP cell lineCell lineProstate cancerProstate cancerTargeted therapyenzalutamideNAMalignant cells-0.2669552.03e-40

GSE131984_Pal

SUM159 cell lineCell lineBreast cancerTriple-negative breast cancer (TNBC)Targeted therapypalbociclibNAMalignant cells-0.2535679.52e-07

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Expression of GTF2H2 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GTF2H2

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GTF2H2

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GTF2H2hsa-miR-480394.3395NM_001515
GTF2H2hsa-miR-570-3p93.8289NM_001515
GTF2H2hsa-miR-550b-3p88.3025NM_001098728
GTF2H2hsa-miR-888-5p86.1008NM_001515
GTF2H2hsa-miR-471984.7079NM_001515
GTF2H2hsa-miR-6778-3p84.2983NM_001098728
GTF2H2hsa-miR-5692a83.7847NM_001515
GTF2H2hsa-miR-428283.3296NM_001515
GTF2H2hsa-miR-5089-5p82.4485NM_001515
GTF2H2hsa-miR-217-5p80.5339NM_001515
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Motifs and transcription factors (TFs) regulating GTF2H2

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GTF2H2taipale_tf_pairs__ETS2_RCCGGAAGTG_HTETS2 (directAnnotation).
GTF2H2taipale_tf_pairs__MEIS1_ELF1_NTGCCGGAAGTN_CAP_reprELF1; MEIS1 (directAnnotation).
GTF2H2metacluster_166.2ELK4; ETS1; ETS1; ETV1; ETV3; ETV4; ETV5; ETV7 (directAnnotation). GABPA (inferredBy_Orthology).
GTF2H2metacluster_191.3EHF; ELF1; ELF1; ELF1; ELF4; ELK1; ELK3; ELK3; ELK4; ELK4; ERF; ETS1; ETS2; ETV3; ETV4; ETV5; FEV; FEV; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; SPDEF; ZNF200 (directAnnotation). ELK1; ELK1; ELK3; ELK3; ELK4; ELK4; ETV1; ETV1; ETV4; ETV4; ETV4; ETV5; GABPA; GABPA (inferredBy_Orthology).
GTF2H2metacluster_191.2ELK4; NR2C2; NR2C2; NR2C2; NR2C2 (directAnnotation). GABPA (inferredBy_Orthology).
GTF2H2jaspar__MA1483.2ELF2 (directAnnotation).
GTF2H2taipale_tf_pairs__ETV5_HOXA2_RSCGGWAATKR_CAPETV5; HOXA2 (directAnnotation).
GTF2H2metacluster_166.4BCLAF1; EHF; ELF1; ELF1; ELF1; ELF1; ELF1; ELF1; ELF2; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK1; ELK3; ELK3; ELK3; ELK3; ELK4; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS1; ETS1; ETS1; ETV1; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV4; ETV4; ETV4; ETV4; ETV5; ETV7; FEV; FEV; FLI1; FLI1; FLI1; FLI1; GABPA; GABPA; GABPA; GABPA; GABPA; GABPA; GABPB1; GATAD1; PHF20; ZBTB25; ZBTB40 (directAnnotation). EHF; ELF1; ELF1; ELF3; ELF5; ELK3; ELK4; ERG; ETS1; ETV1; ETV2; ETV4; FLI1; GABPA; GABPA (inferredBy_Orthology).
GTF2H2swissregulon__hs__ELF2ELF2 (directAnnotation).
GTF2H2cisbp__M08198ELF1 (directAnnotation).
GTF2H2taipale_cyt_meth__ZBTB2_NTTTCCGGTAMN_eDBD_meth_reprZBTB2 (directAnnotation).
GTF2H2metacluster_81.7CREB1 (directAnnotation).
GTF2H2transfac_public__M00024E2F1 (directAnnotation).
GTF2H2transfac_pro__M04826EP300 (directAnnotation).
GTF2H2taipale_tf_pairs__ELK1_HOXA1_RCCGGAAGTAATTA_HTELK1; HOXA1 (directAnnotation).
GTF2H2taipale_tf_pairs__FOXO1_ELK3_RCCGGAWGTKKW_CAPELK3; FOXO1 (directAnnotation).
GTF2H2taipale_tf_pairs__ETV5_FOXI1_RSCGGATGTTGN_CAPETV5; FOXI1 (directAnnotation).
GTF2H2hdpi__FLI1FLI1 (directAnnotation).
GTF2H2metacluster_138.2ELF1; ELF2; ELF4; ELK1; ELK1; ELK1; ELK1; ELK3; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ELK4; ERF; ERG; ERG; ERG; ERG; ETS1; ETS1; ETS2; ETS2; ETV1; ETV1; ETV1; ETV2; ETV3; ETV4; ETV5; ETV5; FEV; FLI1; FLI1; GABPA; GABPA; KMT2B; SPDEF; SPDEF; SPDEF; ZBTB11; ZNF518A; ZNF580 (directAnnotation). ELF1; ELF2; ELF4; ELK1; ELK1; ELK3; ELK4; ERG; ETS1; ETS2; ETV1; ETV2; ETV3; ETV4; ETV5; FEV; FLI1; FLI1; GABPA; SPDEF; SPDEF (inferredBy_Orthology).
GTF2H2taipale_tf_pairs__ELK1_EOMES_TNRCACCGGAAGN_CAPELK1; EOMES (directAnnotation).
GTF2H2taipale_tf_pairs__ETV5_EVX1_RSCGGWAATKR_CAPETV5; EVX1 (directAnnotation).
GTF2H2taipale_tf_pairs__E2F1_ELK1_SGCGCNNNNNCGGAAGN_CAP_reprE2F1; ELK1 (directAnnotation).
GTF2H2taipale_tf_pairs__ELK1_TBX21_TNRCACCGGAAGNN_CAP_reprELK1; TBX21 (directAnnotation).
GTF2H2hdpi__ETV4ETV4 (directAnnotation).
GTF2H2cisbp__M02645ETS1 (directAnnotation).
GTF2H2jaspar__MA1708.1ETV7 (directAnnotation).
GTF2H2taipale_tf_pairs__TEAD4_ETV1_RSCGGAAATRCM_CAPETV1; TEAD4 (directAnnotation).
GTF2H2taipale_tf_pairs__ETV2_FOXO6_RCCGGATGTTKWN_CAPETV2; FOXO6 (directAnnotation).
GTF2H2taipale_tf_pairs__ELK1_HOXA3_RSCGGTAATKR_CAP_reprELK1; HOXA3 (directAnnotation).
GTF2H2swissregulon__mm__E2f7E2F7 (inferredBy_Orthology).
GTF2H2hdpi__TP73TP73 (directAnnotation).
GTF2H2taipale_tf_pairs__ERF_FOXI1_TGTTKMCGGAWRN_CAP_reprERF; FOXI1 (directAnnotation).
GTF2H2jaspar__MA1932.1HOXB13 (directAnnotation).
GTF2H2taipale_tf_pairs__ETV5_HOXA13_NNCGGAWGTNRTWAA_CAPETV5; HOXA13 (directAnnotation).
GTF2H2hdpi__ELF2ELF2 (directAnnotation).
GTF2H2transfac_pro__M04748GABPA (directAnnotation).
GTF2H2taipale_tf_pairs__ETV5_EOMES_TNRCACCGGAWN_CAPEOMES; ETV5 (directAnnotation).
GTF2H2kznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
GTF2H2taipale_tf_pairs__E2F3_HES7_NNNNGCGCSNNNNNCACGTGNN_CAPE2F3; HES7 (directAnnotation).
GTF2H2transfac_pro__M02089E2F3 (directAnnotation).
GTF2H2transfac_pro__M02861GATA6 (inferredBy_Orthology).
GTF2H2jaspar__MA0535.1SMAD9 (inferredBy_Orthology).
GTF2H2metacluster_15.1E2F4; E2F4; E2F4; E2F4; E2F7; ZFP69B (directAnnotation). E2F4 (inferredBy_Orthology).
GTF2H2metacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
GTF2H2jaspar__MA1122.1TFDP1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."