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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GREM1

Summary for GREM1

Gene informationGene symbol

GREM1

Ensembl ID

ENSG00000276886

Entrez ID

26585

Gene namegremlin 1, DAN family BMP antagonist
SynonymsCKTSF1B1|CRAC1|DAND2|DRM|gremlin|HMPS
Gene typeprotein_coding
UniProtAcc

O60565


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Dataset with differentially expressed gene: GREM1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE139386

H3122 cell lineCell lineLung cancerEML4-ALK fusion-positive non-small cell lung cancer (NSCLC)Targeted therapyceritinibNAMalignant cells-0.6389960.00e+00

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Expression of GREM1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GREM1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GREM1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GREM1hsa-miR-448096.4927NM_013372
GREM1hsa-miR-6819-5p94.8209NM_001191322
GREM1hsa-miR-6737-5p94.8209NM_001191322
GREM1hsa-miR-6812-5p93.1046NM_001191322
GREM1hsa-miR-329-5p92.3713NM_001191322
GREM1hsa-miR-446491.4504NM_001191322
GREM1hsa-miR-474891.4504NM_001191322
GREM1hsa-miR-216a-3p90.9674NM_013372
GREM1hsa-miR-128-3p90.9674NM_013372
GREM1hsa-miR-450390.2133NM_013372
GREM1hsa-miR-3922-3p89.7471NM_001191322
GREM1hsa-miR-4753-3p88.9194NM_013372
GREM1hsa-miR-317688.3419NM_001191322
GREM1hsa-miR-3681-3p88.1451NM_013372
GREM1hsa-miR-519087.8048NM_013372
GREM1hsa-miR-4477b87.201NM_001191322
GREM1hsa-miR-1212086.9808NM_001191322
GREM1hsa-miR-4757-5p86.0933NM_001191322
GREM1hsa-miR-6744-3p86.0933NM_001191322
GREM1hsa-miR-4786-3p85.8484NM_001191322
GREM1hsa-miR-477582.9612NM_013372
GREM1hsa-miR-6792-5p82.559NM_001191322
GREM1hsa-miR-7843-3p82.1279NM_001191322
GREM1hsa-miR-427081.1473NM_001191322
GREM1hsa-miR-427980.9916NM_013372
GREM1hsa-miR-6754-5p80.9024NM_001191322
GREM1hsa-miR-444180.8765NM_001191322
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Motifs and transcription factors (TFs) regulating GREM1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GREM1metacluster_55.3E2F6; EGR1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; NRF1; ZBTB2; ZSCAN10 (directAnnotation). NFE2L1; NRF1; NRF1; NRF1 (inferredBy_Orthology).
GREM1transfac_pro__M04950EGR1 (directAnnotation).
GREM1taipale_cyt_meth__E2F2_GCGCGCGCGYW_eDBD_reprE2F2 (directAnnotation).
GREM1taipale_cyt_meth__ZNF385D_NCGTCGCGACGN_eDBD_methZNF385D (directAnnotation).
GREM1taipale_tf_pairs__ERF_HES7_NNCACGTGNNNNCCGGAANN_CAP_reprERF; HES7 (directAnnotation).
GREM1transfac_pro__M00652NRF1 (directAnnotation).
GREM1transfac_pro__M04866HDAC2 (directAnnotation).
GREM1jaspar__MA1122.1TFDP1 (directAnnotation).
GREM1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
GREM1metacluster_34.3EGR1; ETS1; SETDB1; SIX5; SIX5; ZNF143; ZNF76 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."