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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor

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Acts as a drug target< (This gene does not contain this module)

Gene: GMEB1

Summary for GMEB1

Gene informationGene symbol

GMEB1

Ensembl ID

ENSG00000162419

Entrez ID

10691

Gene nameglucocorticoid modulatory element binding protein 1
SynonymsP96PIF|PIF96
Gene typeprotein_coding
UniProtAcc

Q9Y692


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Dataset with differentially expressed gene: GMEB1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.3166832.15e-27

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Expression of GMEB1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GMEB1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GMEB1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GMEB1hsa-miR-448196.8474NM_006582
GMEB1hsa-miR-7-1-3p96.7277NM_001319674
GMEB1hsa-miR-7-2-3p96.7277NM_001319674
GMEB1hsa-miR-4745-5p95.8087NM_006582
GMEB1hsa-miR-429795.7097NM_001319674
GMEB1hsa-miR-6833-5p93.7542NM_006582
GMEB1hsa-miR-449193.5166NM_006582
GMEB1hsa-miR-465793.5166NM_006582
GMEB1hsa-miR-3912-5p90.5807NM_001319674
GMEB1hsa-miR-509390.3286NM_006582
GMEB1hsa-miR-5581-5p90.1462NM_001319674
GMEB1hsa-miR-520a-5p87.98NM_006582
GMEB1hsa-miR-525-5p87.98NM_006582
GMEB1hsa-miR-464887.744NM_006582
GMEB1hsa-miR-429887.5783NM_006582
GMEB1hsa-miR-130287.5783NM_006582
GMEB1hsa-miR-93587.2548NM_001319674
GMEB1hsa-miR-3529-3p85.022NM_006582
GMEB1hsa-miR-6734-3p83.2644NM_006582
GMEB1hsa-miR-10523-5p82.164NM_001319674
GMEB1hsa-miR-204-5p81.9242NM_001319674
GMEB1hsa-miR-211-5p81.9242NM_001319674
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Motifs and transcription factors (TFs) regulating GMEB1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GMEB1metacluster_135.11NR2C2 (directAnnotation).
GMEB1metacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
GMEB1metacluster_144.3ZNF704; ZNF704 (directAnnotation).
GMEB1metacluster_7.13ZFX (directAnnotation).
GMEB1kznf__ZNF730_Imbeault2017_RP_RCADEZNF730 (directAnnotation).
GMEB1cisbp__M00968MTF2 (directAnnotation).
GMEB1metacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GMEB1metacluster_160.20JUND; PRDM15 (directAnnotation).
GMEB1cisbp__M00341PAX6 (directAnnotation).
GMEB1metacluster_198.3ZFP64 (directAnnotation).
GMEB1metacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
GMEB1metacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
GMEB1metacluster_61.1DEAF1; DEAF1 (directAnnotation).
GMEB1cisbp__M00788ZFY (inferredBy_Orthology).
GMEB1kznf__ZNF213_Schmitges2016_RCADEZNF213 (directAnnotation).
GMEB1metacluster_175.1ZNF283 (directAnnotation).
GMEB1hdpi__ZNF304ZNF304 (directAnnotation).
GMEB1metacluster_125.2TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; ZNF611; ZNF611 (directAnnotation). TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2A; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2B; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2C; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2D; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E; TFAP2E (inferredBy_Orthology).
GMEB1metacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GMEB1transfac_pro__M01199TRIM28 (directAnnotation).
GMEB1metacluster_151.2ZNF23 (directAnnotation).
GMEB1transfac_public__M00189TFAP2A; TFAP2B; TFAP2C (directAnnotation).
GMEB1transfac_pro__M01219SP1 (directAnnotation). SP3 (inferredBy_Orthology).
GMEB1transfac_pro__M03806ZBTB7C (directAnnotation).
GMEB1transfac_pro__M00915TFAP2A; TFAP2B; TFAP2C (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.
TFmotifExpressionCell typeDatasetTimepoint
GMEB1dbtfbs__GMEB1_K562_ENCSR928KOR_merged_N1downMalignant cells

GSE175716

NA
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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."