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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GKAP1

Summary for GKAP1

Gene informationGene symbol

GKAP1

Ensembl ID

ENSG00000165113

Entrez ID

80318

Gene nameG kinase anchoring protein 1
SynonymsFKSG21|GKAP42
Gene typeprotein_coding
UniProtAcc

Q5VSY0


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Dataset with differentially expressed gene: GKAP1

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE115251

Kelly cell lineCell lineNeuroblastomaNeuroblastomaTargeted therapyTAE684NAMalignant cells0.5843660.00e+00

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Expression of GKAP1 in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GKAP1

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GKAP1

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GKAP1hsa-miR-548aq-3p98.1812NM_001135953
GKAP1hsa-miR-548j-3p98.1812NM_001135953
GKAP1hsa-miR-548am-3p98.1812NM_001135953
GKAP1hsa-miR-548ae-3p98.1812NM_001135953
GKAP1hsa-miR-548ah-3p98.1812NM_001135953
GKAP1hsa-miR-548aj-3p98.1812NM_001135953
GKAP1hsa-miR-548x-3p98.1812NM_001135953
GKAP1hsa-miR-548av-3p96.5733NM_001135953
GKAP1hsa-miR-607794.6207NM_001135953
GKAP1hsa-miR-477594.1415NM_001135953
GKAP1hsa-miR-431093.9732NM_001135953
GKAP1hsa-miR-7157-5p93.9732NM_001135953
GKAP1hsa-miR-7-5p91.4714NM_001135953
GKAP1hsa-miR-548ah-5p90.5342NM_001135953
GKAP1hsa-miR-360990.5342NM_001135953
GKAP1hsa-miR-607189.2262NM_001135953
GKAP1hsa-miR-3162-5p88.7229NM_001135953
GKAP1hsa-miR-3136-5p87.8467NM_001135953
GKAP1hsa-miR-443987.8467NM_001135953
GKAP1hsa-miR-548bc87.4535NM_001135953
GKAP1hsa-miR-548az-3p87.4535NM_001135953
GKAP1hsa-miR-548e-3p87.4535NM_001135953
GKAP1hsa-miR-548f-3p87.4535NM_001135953
GKAP1hsa-miR-548a-3p87.4535NM_001135953
GKAP1hsa-miR-548ar-3p87.4535NM_001135953
GKAP1hsa-miR-590-3p86.9187NM_001135953
GKAP1hsa-miR-6807-3p83.7688NM_001135953
GKAP1hsa-miR-217-5p83.7688NM_001135953
GKAP1hsa-miR-3692-5p81.0442NM_001135953
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Motifs and transcription factors (TFs) regulating GKAP1

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GKAP1taipale_tf_pairs__E2F1_HES7_RRCRCGYGYNNNNSGCGCSN_CAP_reprE2F1; HES7 (directAnnotation).
GKAP1kznf__ZNF25_Imbeault2017_OM_MEMEZNF25 (directAnnotation).
GKAP1taipale_tf_pairs__ETV5_HES7_NNCACGTGNNNNCCGGAANN_CAPETV5; HES7 (directAnnotation).
GKAP1kznf__ZFP57_Imbeault2017_RP_ChIP-seqZFP57 (directAnnotation).
GKAP1kznf__ZNF777_Imbeault2017_RP_ChIP-seqZNF777 (directAnnotation).
GKAP1metacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
GKAP1metacluster_67.2ZNF501 (directAnnotation). ACAA1; E2F2; E2F2; E2F3; E2F3; FOXN4 (inferredBy_Orthology).
GKAP1metacluster_3.14WT1; WT1 (directAnnotation).
GKAP1swissregulon__hs__ZBTB14ZBTB14 (directAnnotation).
GKAP1cisbp__M07938E2F1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."