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Center for Computational Systems Medicine
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Gene summary

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Datasets with differential expression of this gene

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Expression of this gene in the resistant group across all datasets and cell types

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Significant ligand-receptor pairs related to this gene (This gene does not contain this module)

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Known drug resistance mechanisms of this gene (This gene does not contain this module)

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MicroRNAs (miRNAs) regulating this gene

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Motifs and transcription factors (TFs) regulating this gene

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Acts as a transcription factor (This gene does not contain this module)

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Acts as a drug target< (This gene does not contain this module)

Gene: GK

Summary for GK

Gene informationGene symbol

GK

Ensembl ID

ENSG00000198814

Entrez ID

2710

Gene nameglycerol kinase
SynonymsGK1|GKD
Gene typeprotein_coding
UniProtAcc

P32189


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Dataset with differentially expressed gene: GK

check buttonDifferentially expression genes between the resistant and sensitive groups. A positive avg_log2FC represents significantly high expression in the resistant group, while a negative avg_log2FC represents significantly low expression in the resistant group.
DatasetSourceTissueCancer type level1Cancer type level2Drug typeRegimenTimepointCell typeavg_log2FCp_val_adj

GSE140440

DU145 and PC cell linesCell lineProstate cancerProstate cancerChemotherapydocetaxelNAMalignant cells2.632172.36e-03

GSE207422_Sin

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapysintilimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.4698246.12e-11

GSE207422_Tor

patientsTumor tissueLung cancerEGFR/ALK mutation negative non-small cell lung cancer (NSCLC)Immunotherapytoripalimab + carboplatin + (docetaxel or pemetrexed or emcitabine)postNeutrophils0.3474522.64e-02

GSE175716

PDXTumor tissueLiver cancerAdvanced hepatocellular carcinomaTargeted therapysorafenibNAMalignant cells-0.5692560.00e+00

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Expression of GK in the resistant group across all datasets and cell types

check buttonRed dots represent significantly high expression in the resistant group, while blue dots represent significantly low expression in the resistant group. White dots represent that there is no significant difference in the expression of this gene between the resistant and sensitive groups. Blank represents that this cell type is not present in this dataset. (If the image exists, the user can click on it to enlarge it in a new window.)
boxplot

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Significant ligand-receptor pairs related to GK

check buttonThis table shows the significant ligand-receptor pairs related to this gene across all datasets, timepoints and conditions. (Complete files can be downloaded from the download section.)

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Known drug resistance mechanisms of this gene

check buttonThis table shows the known drug resistance mechanisms of this gene. Clicking on this gene will link to another database that displays more drug resistance-related information.

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MicroRNAs (miRNA) regulating GK

check buttonThis table shows the miRNAs with a score of more than 80 regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmiRNAScoreGeneBank accession
GKhsa-miR-316395.857NM_000167
GKhsa-miR-452895.1623NM_000167
GKhsa-miR-4659a-3p92.2602NM_000167
GKhsa-miR-4659b-3p92.2602NM_000167
GKhsa-miR-450188.5543NM_000167
GKhsa-miR-95-5p88.2411NM_000167
GKhsa-miR-9983-3p87.8181NM_000167
GKhsa-miR-397387.3798NM_000167
GKhsa-miR-4795-3p86.7382NM_000167
GKhsa-miR-1213686.6477NM_000167
GKhsa-miR-427686.2545NM_000167
GKhsa-miR-676-5p85.9409NM_000167
GKhsa-miR-494-3p85.198NM_000167
GKhsa-miR-29b-2-5p84.789NM_000167
GKhsa-miR-182-5p84.6814NM_000167
GKhsa-miR-323a-5p83.6646NM_000167
GKhsa-miR-366883.4613NM_000167
GKhsa-miR-186-3p82.4952NM_000167
GKhsa-miR-32-3p82.2584NM_000167
GKhsa-miR-6818-5p81.7694NM_000167
GKhsa-miR-3177-5p80.3216NM_000167
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Motifs and transcription factors (TFs) regulating GK

check buttonThis table shows the Motifs and transcription factors (TFs) regulating this gene. (Complete files can be downloaded from the download section.)
Gene symbolmotifTF_highConf
GKmetacluster_195.2EGR2; KLF10; KLF10; KLF11; KLF11; KLF11; KLF13; KLF13; KLF13; KLF13; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF15; KLF15; KLF16; KLF3; KLF8; KLF9; KLF9; KLF9; SP1; SP1; SP1; SP3; SP3; SP4; SP8; SP8; SP8; SP9; SP9 (directAnnotation). EGR1; KLF1; KLF12; KLF13; KLF14; KLF14; KLF14; KLF14; KLF14; KLF14; KLF16; KLF17; KLF17; KLF17; KLF17; KLF18; KLF18; KLF18; KLF18; KLF18; KLF18; KLF2; KLF2; KLF2; KLF3; KLF4; KLF5; KLF5; KLF5; KLF6; KLF7; KLF7; KLF8; KLF9; SP1; SP3; SP4; SP4; SP5; SP5; SP5; SP6; SP7; SP8; SP9 (inferredBy_Orthology).
GKkznf__ZBTB14_Schmitges2016_RCADEZBTB14 (directAnnotation).
GKmetacluster_3.5KLF14; KLF15; KLF15; KLF16 (directAnnotation).
GKtransfac_pro__M07387ZBTB7A (directAnnotation).
GKtransfac_pro__M07461KLF1; KLF10; KLF11; KLF12; KLF13; KLF15; KLF16; KLF17; KLF2; KLF3; KLF4; KLF5; KLF6; KLF7; KLF8; KLF9 (directAnnotation).
GKtransfac_pro__M00716ZBTB14 (directAnnotation).
GKswissregulon__hs__CHD1CHD1 (directAnnotation).
GKhdpi__HIP2UBE2K (directAnnotation).
GKtaipale_tf_pairs__GCM1_SPDEF_RTGNKGGCGGAWG_CAP_reprGCM1; SPDEF (directAnnotation).
GKmetacluster_170.2KLF1; KLF10; KLF10; KLF11; KLF11; KLF11; KLF12; KLF12; KLF14; KLF15; KLF17; KLF2; KLF5; KLF7; KLF7; KLF8; MAZ; MAZ; PATZ1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP2; SP4; SP4; SP5; SP6; SP7; SP8; SP9; ZNF281 (directAnnotation). E2F1; E2F4; KLF10; KLF13; KLF14; KLF17; KLF2; KLF7; SP1; SP1; SP3; SP4; SP5; SP6; SP7 (inferredBy_Orthology).
GKtransfac_pro__M04893TAF1 (directAnnotation).
GKtransfac_pro__M03876ZBTB33 (directAnnotation).
GKmetacluster_15.2E2F1; E2F1; E2F1; E2F1; E2F1; E2F3; E2F4; E2F4; E2F4; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F6; E2F7; TFDP1; TFDP2; ZNF566; ZNF566; ZNF574 (directAnnotation). E2F3; E2F3; E2F4 (inferredBy_Orthology).
GKmetacluster_133.1ZNF304; ZNF304; ZSCAN22 (directAnnotation).
GKkznf__ZNF441_Imbeault2017_RP_RCADEZNF441 (directAnnotation).
GKmetacluster_3.7SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP1; SP2; SP2; SP2; SP2; SP3; SP3; SP3; SP4; SP4; SP4; SP4; SP4; SP4; SP5 (directAnnotation).
GKmetacluster_135.11NR2C2 (directAnnotation).
GKmetacluster_135.10MBD2; MBD2; MECP2; MECP2 (directAnnotation).
GKmetacluster_144.3ZNF704; ZNF704 (directAnnotation).
GKmetacluster_7.13ZFX (directAnnotation).
GKcisbp__M00968MTF2 (directAnnotation).
GKmetacluster_155.23BCL11B; ZNF711; ZNF711 (directAnnotation). ZFY (inferredBy_Orthology).
GKcisbp__M00341PAX6 (directAnnotation).
GKmetacluster_198.3ZFP64 (directAnnotation).
GKmetacluster_141.5NR3C1; THAP1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY1; YY2; YY2; ZNF597 (directAnnotation). YY1; YY1; YY1; YY2; ZFP42 (inferredBy_Orthology).
GKmetacluster_151.1KAT7; PML; SMAD5; TAF1; ZFP37; ZGPAT; ZNF519; ZNF519; ZNF571; ZNF770; ZNF770; ZNF770; ZSCAN22; ZSCAN22 (directAnnotation).
GKmetacluster_61.1DEAF1; DEAF1 (directAnnotation).
GKcisbp__M00788ZFY (inferredBy_Orthology).
GKmetacluster_175.1ZNF283 (directAnnotation).
GKhdpi__ZNF304ZNF304 (directAnnotation).
GKtransfac_pro__M02844BCL6B (inferredBy_Orthology).
GKkznf__ZNF682_Isakova2017_SMiLE-seqZNF682 (directAnnotation).
GKmetacluster_151.2ZNF23 (directAnnotation).
GKtransfac_pro__M06586ZNF479 (directAnnotation).
GKtaipale_tf_pairs__FOXO1_ETV4_RCCGGAWGTKKN_CAPETV4; FOXO1 (directAnnotation).
GKtransfac_pro__M06556ZNF383 (directAnnotation).
GKmetacluster_155.21ZNF454; ZNF454 (directAnnotation).
GKmetacluster_2.9IRF2; IRF2; IRF2; PRDM1; PRDM1 (directAnnotation). PRDM1 (inferredBy_Orthology).
GKmetacluster_57.3ARNT; ATF3; ATF3; ATF3; ATF3; BHLHE40; BHLHE40; BHLHE40; BHLHE41; BHLHE41; BHLHE41; MITF; MITF; MITF; MLX; MLXIPL; SREBF1; SREBF1; SREBF1; SREBF1; SREBF2; SREBF2; SREBF2; TFE3; TFEC; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF1; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; USF2; ZNF507 (directAnnotation). ARNTL; BHLHE40; BHLHE40; BHLHE41; HELT; HES1; HES2; HES3; HES5; HES6; HES7; HEY1; HEY2; HEYL; MLX; MLX; SREBF1; SREBF2; TFE3; USF1; USF1; USF2; USF2 (inferredBy_Orthology).
GKhomer__GGAAATTCCC_NFkB-p65-RelRELA (inferredBy_Orthology).
GKtaipale_tf_pairs__FLI1_FOXI1_RCCGGATGTTKWY_CAPFLI1; FOXI1 (directAnnotation).
GKkznf__ZNF77_Imbeault2017_OM_MEMEZNF77 (directAnnotation).
GKhocomoco__ZN713_HUMAN.H11MO.0.DZNF713 (directAnnotation).
GKtransfac_pro__M06012ZNF586 (directAnnotation).
GKtfdimers__MD00143IKZF1; MZF1 (directAnnotation).
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Acts as a transcription factor

check buttonThis table shows that this differential gene acts as a transcription factor.

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Acts as a drug target

check buttonThis table shows that this differential gene acts as a drug target.



1"Sun X, Zhang Y, Li H, Zhou Y, Shi S, Chen Z, He X, Zhang H, Li F, Yin J, Mou M, Wang Y, Qiu Y, Zhu F. DRESIS: the first comprehensive landscape of drug resistance information. Nucleic Acids Res. 2023 Jan 6;51(D1):D1263-D1275. doi: 10.1093/nar/gkac812. PMID: 36243960; PMCID: PMC9825618."
2"Wishart DS, Feunang YD, Guo AC, Lo EJ, Marcu A, Grant JR, Sajed T, Johnson D, Li C, Sayeeda Z, Assempour N, Iynkkaran I, Liu Y, Maciejewski A, Gale N, Wilson A, Chin L, Cummings R, Le D, Pon A, Knox C, Wilson M. DrugBank 5.0: a major update to the DrugBank database for 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D1074-D1082. doi: 10.1093/nar/gkx1037. PMID: 29126136; PMCID: PMC5753335."